ggKbase home page

scnpilot_expt_750_bf_scaffold_4379_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(196..777)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376997 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 178.0
  • Bit_score: 242
  • Evalue 4.90e-61
putative transcriptional regualtor, TetR family Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 193.0
  • Bit_score: 260
  • Evalue 1.80e-66
putative transcriptional regualtor, TetR family similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 189.0
  • Bit_score: 237
  • Evalue 2.60e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_57_36 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGTCCCGTCTTGAGCAGAAGTCCCAGACACGCCAACGCATCGTGGAAGCTGCAGGCCGCAGTTTTCGCAAGGGTGGATTTGGCGGTGTGGGTGTTGACGGACTGGCGAAGGAGGCAGGGGTTACATCCGGAGCTTTCTACGGGCACTTTGGCTCGAAGTCAGATGCGTTCCATGAGGCTGTGGTGCACGGGATGGCGGATCTGAAGGCTGGTGTGCTGTACTACCAACAGACGTATGGAGGCTCGTGGTGGCCAGAGTTCGTGAAGTTCTACCTGGGCGCCAAGCGACGTTGTGACCTGGCAGAAAGCTGCGGTCTACAAGCGCTTTCTCCTGAGGTGGCCCGGGCTTCCCCAGAAGTCAGAGAAGCTTTCGAAGGCGGCCTGAAGGAAGTCTCTGCCGCAATCCTCTCGGGCCCCAAGTCGCCCAAGGCACCGCGTGATGAGGCTGGAGCGTGCTCAGCACTCGCTGCATTGGTCGGGGCTGTCACCCTGGCGCGGGCAGTGGGTTCGGAGCAGTTTGGTAACGCGATCGCCGCATCGGCTGGTGTGGCGCTTCTTGGGGAGCTTTGGCAACCTAGGTAG
PROTEIN sequence
Length: 194
MSRLEQKSQTRQRIVEAAGRSFRKGGFGGVGVDGLAKEAGVTSGAFYGHFGSKSDAFHEAVVHGMADLKAGVLYYQQTYGGSWWPEFVKFYLGAKRRCDLAESCGLQALSPEVARASPEVREAFEGGLKEVSAAILSGPKSPKAPRDEAGACSALAALVGAVTLARAVGSEQFGNAIAASAGVALLGELWQPR*