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scnpilot_expt_750_bf_scaffold_5249_8

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 2720..3286

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM67_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 168.0
  • Bit_score: 118
  • Evalue 1.00e-23
Putative RNA polymerase sigma-E factor {ECO:0000313|EMBL:CDS95477.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 196
  • Evalue 3.20e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 168.0
  • Bit_score: 118
  • Evalue 2.90e-24

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGCAAAAGTTGAATCAAGATCCCTTTTTATGGACTGAATTGCGGTATGCAATTGTATTTGATCGAGACCAGCTTGCATTTAAAACTTTATTTAAAAAATTTTATCTCGATTTATATGACTTTGGCTACGCAATTATTAAGTCACCAGTTCCAGTTGAGGATATTATTTCAGAAATTTTCATGAAATTGTGGCTATTGGAAGATAAATTAATGGAAATTGAAAACATTAAAACTTATCTTTTTAGGTCTGTAAGAAATAATGCCATTAAGCATCTTGAAAGACAACATACCCATGTGGATATTTCAGAAATTATTGACTTTAACTATCAATATCCAAGTGTGGAGCAAGAATATATTTCCAGCGAAAACCTGAAAATTATACAACAGATCATCGATGAATTGCCTTCCAAGTGCAAAATGGCTTTTACTTTAGTCAAGGAGCTTGGCTTTACCTATCATGAAACGGCTGCCATCATGGAAATTTCTACGAATACCGTTGACCGACACATTCAACTGGCTCTCCGTCGTTTAAGAGATTCTATTACTTGTAAAAAAATAAACAGCTAG
PROTEIN sequence
Length: 189
MQKLNQDPFLWTELRYAIVFDRDQLAFKTLFKKFYLDLYDFGYAIIKSPVPVEDIISEIFMKLWLLEDKLMEIENIKTYLFRSVRNNAIKHLERQHTHVDISEIIDFNYQYPSVEQEYISSENLKIIQQIIDELPSKCKMAFTLVKELGFTYHETAAIMEISTNTVDRHIQLALRRLRDSITCKKINS*