ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_6192_8

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 4004..4501

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBJ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 146.0
  • Bit_score: 190
  • Evalue 1.10e-45
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 146.0
  • Bit_score: 190
  • Evalue 3.10e-46
Transcriptional regulator {ECO:0000313|EMBL:AHB47847.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 146.0
  • Bit_score: 190
  • Evalue 1.50e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGGTCGCACGCCACGGCTCCACTGACGGAGGTTCGGTCATTCGGGTTTTGCTCGTAGAGGATGACAAGGCAATCGCCGGCCGCCTTCTGGATGGCTTGGCGGAGGCGGGCTTTGTCACCGATCACATCGAGAATGGCGAGGATGCTTGTGCGATGGGCCGCGATCATCATTATGACGTGGCCATCCTCGATCTCGGCTTGCCGGGATTGGGAGGGTTGGGGGTGCTGGAATACTGGCGTGGCAGCGGAAGAAATTTCCCCGTGTTGATTTTGACGGCCCAGGGTTCGTGGTCGGAAAAGGTGAAGGGCTTGAACGCAGGCGCCGATGACTATATCGGCAAGCCTTTTCACATGCTCGAGATCATCGCGCGGATTCATGCCCTCGTGCGCCGGTCGGCCGGCGTGTCTCATCCCGTACTCACTCATAAAGACGTCACGCTCGATACCATCGCTGGAAGGGTCTATGTCGCCGGCTGTCCGACATCAACACCCGTGAGA
PROTEIN sequence
Length: 166
VVARHGSTDGGSVIRVLLVEDDKAIAGRLLDGLAEAGFVTDHIENGEDACAMGRDHHYDVAILDLGLPGLGGLGVLEYWRGSGRNFPVLILTAQGSWSEKVKGLNAGADDYIGKPFHMLEIIARIHALVRRSAGVSHPVLTHKDVTLDTIAGRVYVAGCPTSTPVR