ggKbase home page

scnpilot_expt_750_bf_scaffold_6514_4

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(2768..4528)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator {ECO:0000313|EMBL:KGO88994.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium s similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 495.0
  • Bit_score: 532
  • Evalue 1.00e-147
Putative transcriptional regulator id=4254189 bin=GWF2_Bacteroidetes_29_10 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 501.0
  • Bit_score: 502
  • Evalue 7.90e-139
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 492.0
  • Bit_score: 463
  • Evalue 6.70e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium suncheonense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1761
ATGCAGAAAAAAAGAATCTTCATAAGCAGTGTCCAATCGGAGTTTGCGCAAGAACGTCAGTTGTTGTGCGATTATTTGTTTTCCGATGCGCTACTTGGCCGGTTCTTCGATCCTTTCATCTTTGAGAATGTGCCAGCCTTGAATGCGCATCCTTCGGAGGTGTTTCTTGGTGAAGTAAAAACTTGCGACATATTCCTGTGTCTTTTAGGGAGAAATTATGGCTTTGAAGACAACGAGGGGATTTCTCCCACCGAGCGGGAGTTTGACTGTGCCACCGAAAACAACAAAATCAGGCTGGTGTATGTCAAGAACACTCTTGAAGAAAGGCATCCGAAAGAAATACAGCTGATAAAGAAGGCCGAGAATTCAATTGTTCGCCGAGGATTTGAGACGCCCGACAATTTAAAAGCTGCCGTCTATGCTTCTTTGGTTAATTATCTCATCGAGAATGAATTAATCCGGACATCACCTTTTGATGCGGCATTGCATCCCGAAGCAGTCATCTCCGATCTGGATGAATTGAAAATCAAGAAGTTTGTCGCTGCCGCACATAAAAAACGCAATTTCCCTTTTGATGAAGATGCACATCCCGAGGACATACTCACTCACCTCAATTTGGTCAAATCAGGGAGAGTCACACATGCTGCTTTGCTACTCTTTGCCGACAATCCCCAGCGTTTTTTTATCACATCTGAAGTGAAATGTGCACATTTCCATGGAGTGGCTGTTTCAAAACCCATTCCATCTTATCAGGTATATAAAGGCGATGTGTTCGAGATGGTGGCACAAGCAGTGGATTTTGTGCTTTCCAAGATCAATCTCTATGTGGGTTCGCGTACTAAGAGCGAAACCGTCGATGTGGAGTATGAAATACCCGTTGAAGCAGTCACGGAAGCTATTGTCAATGCTGTGGCGCATCGTGATTACACGAGCCATGCGAGTGTGCAGGTAATGCTTTTTGCCGACAGGCTTGAAATATCCAATCCTGGCAAGTTGCCATTCGGCCTCACGGTGGAGAAGCTACTTGTTTCGCACAATTCTATTCCGGCTAACCCCTTGCTGGCCGAACCGATGTATCTGAATGGAACGATTGAACGAATGGGCACTGGAACTCAAGAAATAGTGGGCAAGTGTAAGCAAAAAGGCTTGGTTGAACCTTCCTTTGTGCAAGATACCGAGTTCAAGGTGATTCTCTATAGGCCTCATTTCTCTTCTACCCACCAAGAAACCCATCAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCCGAGTATTCGGCAAGTCAATTGATGACGATGCTTGGATTGGTGGACAAGGCTAATTTTAGGGCTGTTTACTTGACTCCTGCGATAAGTGTCGAGGTTATAGAAATGAAATACAGGGATAACCCAAGACACCGATACCAGCGCTATTTCCTCTCCAAGAAGGGGAAAGAAGAACGTCTGATTATATCGAAGCCTGATCTTACTTCGACCCATCAGGAAACCCATCAGGAAACCCACCAGGAAATGTCTGCGAAGGTGCATAAATTGCTCCAAGTAATGGAAGACGGAGATTATGCTGCTAACGAATTGATGGAGAAAATCGGGTTGACCGATAAAACCAATTTCAGGGCAGGTTATTTGAAACCTGCTATAGAATCAGGTATGGTTGATTTCAGATATAAGGATAATCCGACACACCGAAACCAACGTTATTTTCTAACCGAAAAAGGGTCAAAAAAAAGAAAACAATAA
PROTEIN sequence
Length: 587
MQKKRIFISSVQSEFAQERQLLCDYLFSDALLGRFFDPFIFENVPALNAHPSEVFLGEVKTCDIFLCLLGRNYGFEDNEGISPTEREFDCATENNKIRLVYVKNTLEERHPKEIQLIKKAENSIVRRGFETPDNLKAAVYASLVNYLIENELIRTSPFDAALHPEAVISDLDELKIKKFVAAAHKKRNFPFDEDAHPEDILTHLNLVKSGRVTHAALLLFADNPQRFFITSEVKCAHFHGVAVSKPIPSYQVYKGDVFEMVAQAVDFVLSKINLYVGSRTKSETVDVEYEIPVEAVTEAIVNAVAHRDYTSHASVQVMLFADRLEISNPGKLPFGLTVEKLLVSHNSIPANPLLAEPMYLNGTIERMGTGTQEIVGKCKQKGLVEPSFVQDTEFKVILYRPHFSSTHQETHQEXXXXXXXXXXXXXXXXDAEYSASQLMTMLGLVDKANFRAVYLTPAISVEVIEMKYRDNPRHRYQRYFLSKKGKEERLIISKPDLTSTHQETHQETHQEMSAKVHKLLQVMEDGDYAANELMEKIGLTDKTNFRAGYLKPAIESGMVDFRYKDNPTHRNQRYFLTEKGSKKRKQ*