ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_8460_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(3..2072)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZYC0_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 449.0
  • Bit_score: 554
  • Evalue 1.20e-154
tripartite tricarboxylate transport(TTT) family subunit TctA Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 429.0
  • Bit_score: 580
  • Evalue 3.80e-162
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 449.0
  • Bit_score: 554
  • Evalue 3.40e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2070
ATGACTGACGACAATCCGGCGCTGCAAAGCGCCGTGCGCAAGGCGACCATTCGCCTCCTGCCCTTTCTGGGCCTGATGCTGATCCTGAACTTTCTCGATCGATCCAATGTCGGCTTTGCCAAGGTGGCCTATCAGGCCGATACCGGCATTTCGGATGCGGCCTATGCCTTCGGCGCCGGTATTCTCTATCTCGGCTATGCCACCTTCGAAGTGCCCAGCAACCTGATCATGCAGCGCGTCGGCGCCCGCCTGTGGCTTAGCCGCATCATGATCACATGGGGCATCGTCTCGGCCTGCATGGTTTTTGCCCATACGCCGATGAGCTATTACATCGTCCGCTTCCTGCTCGGCGTCTGCGAGGCAGGTTTCTATCCCGGCGTGCTGCTCTATCTGACCTACTGGTTCCCCGCCAAGCAGCGAGCACGCGCAACAGGCCTGTTCTATCTCGGCATTCCCCTGTCGCTGGTGATCGGCGCGCCGCTTTCCGGCTGGCTGCTCACCCATCACGACGTCCTCGGCCTCACCAACTGGCAATGGATGTTCGCAGTCGAAGGCCTGGCGGCGACTGTCGTTGGCGTCCTCGCTCTCTTCTTCCTGACCAGCCGTCCCAACGAGGCGAAGTGGCTGACGACCGAAGAGAAAAATGCGCTGAACGCCGTCATCGAAGCGGAAGAGCGCAGCAAGCTTTCCGAGGTGAAGCATTCCGTCTTCAGCGTACTGAAGGATTGGCGCGTCCTTGCCTTCATCGGCATTTATCTGTTCATCCAGGTCGGTGTCGGCCCGATCACCTTCTACCTGCCGCCGGAATCGGCCCTCATCATGCTCGCCGGCATCTACTACGGCGCGCAGTATGGTGGCTCGACCACGGCGATCCTCGCCCGCCTGCCGGGCGAGACATCTTCGGTGGTGACCTGCCTCGACGGCTACCAGATGGCGGTGCAGGGCCGCGCCGGGCCGGCGCTCGCCATCGCGGCGCTCGCCTCCTTCTTCGCCGGCACGGTCTCGACGCTGATCGTGGCGCTGTTTGCGCCGGCGCTGGCCAAGGTCGCGCTCTACTTCACCGACTACGAATATTTCTCGCTGATGGTACTGGGGCTCGTCGGCGCGGTGGTGATGGCGCGCGGCTCGGTTCTGCGGGCGATCGCGATGATCTTCGTCGGCATCCTGATCGGCTGCGTCGGCACCGACGTCAACACCGGCATCAGCCGCTACACGCTCGGCTTCCCAGAACTGCTCGACGGCATCAGCTTCGTGCCGATCGCCATCGGCCTGTTCGGGCTCGCCGACATCATGGCCAATCTCGAGCGGCCGCGGGAGCAGCCGACCATCAAGACGGCCGGCCTCAAGGGGCTGTGGCCGAGCCGCTCGGAGTTCCGGCAGGGCACGCCGGCGGCCGTGCGCGGCACGCTGCTCGGCTCGGCGCTCGGCATCCTGCCCGGCGGCGGGGCGGTGCTCGCCTCGTTCGCCTCCTACGCGCTGGAGCGGCGCATCGCCGCCAACCCGCAGCGGTTCGGCAAGGGCGCGGTCGAGGGGCTGGCGGGGCCGGAGGCGGCCAACAATGCTGGCGCGCAGACCTCGTTCATCCCGATGCTAACGCTCGGCCTGCCGTCCAACGTGGTGATGGCGCTGATGATCGGCGCGATGATGCTGCAGGGCATCCAGCCCGGGCCGCAGGTGATGACCGAGCGGCCGGGGCTGGTGTGGGGCATGATCGTCAGCATGTGGATCGGCAACCTCATGCTGGTGATCATCAACCTGCCGCTGATCGGCATCTGGGTTCAGCTCGTGCGCATCCGCTACGAGTTCCTGTTCGCGATGATCATCGTGTTCTGCTGCATGGGCACCTACGGCATCAACAACTCCGTCTTCGACGTGTTCATCGCCGTGGTTTTCGCGCTGTTCGGCTACCTGCTGATCAAGCTCGACTGCGAGCCGGCGCCGCTGGCGCTGGGCATGATCCTCGGGCCGATGATGGAGGAGAATTTGCGGCGCGGCATGCAGCTCGTGCACGAGAACCGGCGCATCTTCGGCAGCCTGAACGTCGAGGAGAACATCATCCTCGCCGGGCTC
PROTEIN sequence
Length: 690
MTDDNPALQSAVRKATIRLLPFLGLMLILNFLDRSNVGFAKVAYQADTGISDAAYAFGAGILYLGYATFEVPSNLIMQRVGARLWLSRIMITWGIVSACMVFAHTPMSYYIVRFLLGVCEAGFYPGVLLYLTYWFPAKQRARATGLFYLGIPLSLVIGAPLSGWLLTHHDVLGLTNWQWMFAVEGLAATVVGVLALFFLTSRPNEAKWLTTEEKNALNAVIEAEERSKLSEVKHSVFSVLKDWRVLAFIGIYLFIQVGVGPITFYLPPESALIMLAGIYYGAQYGGSTTAILARLPGETSSVVTCLDGYQMAVQGRAGPALAIAALASFFAGTVSTLIVALFAPALAKVALYFTDYEYFSLMVLGLVGAVVMARGSVLRAIAMIFVGILIGCVGTDVNTGISRYTLGFPELLDGISFVPIAIGLFGLADIMANLERPREQPTIKTAGLKGLWPSRSEFRQGTPAAVRGTLLGSALGILPGGGAVLASFASYALERRIAANPQRFGKGAVEGLAGPEAANNAGAQTSFIPMLTLGLPSNVVMALMIGAMMLQGIQPGPQVMTERPGLVWGMIVSMWIGNLMLVIINLPLIGIWVQLVRIRYEFLFAMIIVFCCMGTYGINNSVFDVFIAVVFALFGYLLIKLDCEPAPLALGMILGPMMEENLRRGMQLVHENRRIFGSLNVEENIILAGL