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scnpilot_expt_750_bf_scaffold_18004_3

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(1343..1606)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraG n=1 Tax=Pseudomonas aeruginosa VRFPA08 RepID=V8EC89_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 89.0
  • Bit_score: 159
  • Evalue 1.40e-36
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 86.0
  • Bit_score: 158
  • Evalue 9.00e-37
Conjugative coupling factor TraD, PFGI-1 class {ECO:0000313|EMBL:KDD63737.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 89.0
  • Bit_score: 158
  • Evalue 3.40e-36

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
TGTTTCGCGCTGCTGCAAGGCGGTCAACTCTGGAAGATCAGGATGCCGCTTCCCGCGCCAGACCCGGACGAAGTGATGCCGGCGGACTTGCAGCAACTGGCCGGGTACATGCGCCAAAGCTACAGCGAGGCCGCGCAGTGGTGGGAGTTCACCAGTTCCCCCGTCTTGCAGGATGCGGCCTTGCCCGACGATCTGCTCAATGATGCTGCTCCGGTCGGGCCTGTCGCAGTAGCCACCGACGCCGGCGACGAGGCCTCGCTATGA
PROTEIN sequence
Length: 88
CFALLQGGQLWKIRMPLPAPDPDEVMPADLQQLAGYMRQSYSEAAQWWEFTSSPVLQDAALPDDLLNDAAPVGPVAVATDAGDEASL*