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scnpilot_expt_750_bf_scaffold_22863_3

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(1296..2015)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative coupling factor TraD, PFGI-1 class n=1 Tax=Pseudomonas aeruginosa BL20 RepID=U9HPA3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 4.10e-118
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 1.20e-118
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQL42023.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 5.70e-118

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GGCGAGCGCGTCGGCCACTCGCTGGTGCTGGGCACCACGCGCGTCGGCAAGACCCGGCTGGCCGAACTGTTCGTGACCCAGGACATCCGGCGCGTGAACGCTGCGGGCGAGCACGAGGTGGTGATCGTGATCGACCCCAAGGGCGATGCCGATCTCCTGAAGCGGATGTACGTAGAGGCCAAGCGCGCGGGCCGCGAAGGCGAGTTTTACGTCTTTCATTTGGGCTGGCCGGACATTTCCGCGCGCTACAACGCCGTGGGCCGCTTTGGGCGCATCAGCGAGGTGGCCACCCGCGTCGCGGGGCAGCTTTCCGGCGAAGGCAACAGCGCGGCGTTCCGCGAGTTCGCCTGGCGCTTCGTCAACATCATTGCGCGCGCGTTGGTGGAGCTGGGGCAGCGCCCGGACTACATGCTGATCCAGCGGCACGTCATCAACATCGACGCGCTGTTCATCGAGTACGCCCAGCATTACTTCGCCAAGACCGAGCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGATCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCGAGAAGCGCGTGGTGGCGCTGGAGCAGTACCTCTCGCAGGCGCGCAACTACGACCCGGTGCTGGATGGCCTGCGCACGGCGGTTCGCTATGGCTCCGAACTACTCCGACCTGGCCGACCCGCGCCCGATCTTCGACTGGATGCAGATCATCCGTAA
PROTEIN sequence
Length: 240
GERVGHSLVLGTTRVGKTRLAELFVTQDIRRVNAAGEHEVVIVIDPKGDADLLKRMYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKINEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRTAVRYGSELLRPGRPAPDLRLDADHP*