ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_21574_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 221..1423

Top 3 Functional Annotations

Value Algorithm Source
ornithine decarboxylase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003660238 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 377.0
  • Bit_score: 643
  • Evalue 1.10e-181
  • rbh
Orn/DAP/Arg decarboxylase 2 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 377.0
  • Bit_score: 638
  • Evalue 1.80e-180
Orn/DAP/Arg decarboxylase 2 {ECO:0000313|EMBL:ACB94723.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indi similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 377.0
  • Bit_score: 638
  • Evalue 8.80e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGTGCGCGTCCAACCACCCGATGTTTGATGGTTTGCGCGGCCGAGGTCGCGCCATTGGAAGGGATGCCGCGATGACCGATCGCATTCAGGAATTCTTCCGTGCTCGCCGCGCCGAAGGCCGCGACACTGGACCTTGCCTTGTCGTCGACCTCGAGGTCGTGCGCGACAACTACAACGCCTTTGCCCGGGCGCTGCCGGATACGCGCGTCTTCTACGCCGTGAAGGCGAACCCGCAGCCGGCCGTGCTCGACTTGCTCGCCAAGCTGGGCTCCTGCTTCGACACCGCTTCGGTGGTCGAGATTCAGCAGGTGCTCGCCACCGGCTGCACGCCCGATCGCATCAGCTTCGGCAACACCATCAAGAAGGAGCGCGACATCGCGCGCGCCTACGAGCTCGGCATTCGTCTGTTCGCCGTGGACAGCCAGATCGAGGTCGAGAAGGTGGCGCGCGCCGCTCCGGGTTCGAAGGTGTTCTGTCGCATTCTGTGCGACGGTGCCGGCGCCGAATGGCCGCTGTCACGTAAGTTTGGCTGCGTGCCGGAAATGGCCGTGGGCGTGCTCGAACACGCGCATCGTCTGGGCCTGGCCGCTTATGGCATTTCGTTCCACGTCGGATCGCAGCAGCGCAATCCGAAGATGTGGGACGGCGCGCTGAAGTCCTCGGCCGGTATCTTCCGTGAGCTGGCCGAGCGCGGCATCCACCTGTCGATGGTCAACCTCGGCGGCGGCTTCCCGACGAAATATCTGCGCGATGTGCCGGCGGTGAAGGCCTACGGCCAGTCGATCTTCCGCAGCCTGCGTAAGCATTTCGGCAACCGCATTCCGGAAACGATCATCGAACCGGGTCGCGGCATGGTCGGCAATGCTGGCGTCATCGAGGCGGAAGTCGTTCTGATCTCGAAGAAGTCGGACGACGACAAGGTGAAGTGGGTTTACCTCGACATCGGCAAGTTCAACGGACTGGCCGAGACCATGGATGAGATGATCCGCTATCCGATCCGTACCGACTTCGATGGTGGCGAGATGGAGCCGTGCGTGATCGCGGGCCCGACCTGCGATTCCGTCGATGTGCTCTACGAGAAGGAGCCGTATCTGCTCCCCGTCTCGCTGGAGATTGGCGCGAAAGTGCTGATCGAAGGCACGGGCGCTTACACGACGACCTATTCGGCCGTCGCCTTCAACGGCTTCGAGCCGCTCAAGGCC
PROTEIN sequence
Length: 401
MCASNHPMFDGLRGRGRAIGRDAAMTDRIQEFFRARRAEGRDTGPCLVVDLEVVRDNYNAFARALPDTRVFYAVKANPQPAVLDLLAKLGSCFDTASVVEIQQVLATGCTPDRISFGNTIKKERDIARAYELGIRLFAVDSQIEVEKVARAAPGSKVFCRILCDGAGAEWPLSRKFGCVPEMAVGVLEHAHRLGLAAYGISFHVGSQQRNPKMWDGALKSSAGIFRELAERGIHLSMVNLGGGFPTKYLRDVPAVKAYGQSIFRSLRKHFGNRIPETIIEPGRGMVGNAGVIEAEVVLISKKSDDDKVKWVYLDIGKFNGLAETMDEMIRYPIRTDFDGGEMEPCVIAGPTCDSVDVLYEKEPYLLPVSLEIGAKVLIEGTGAYTTTYSAVAFNGFEPLKA