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scnpilot_expt_750_bf_scaffold_27748_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(2..898)

Top 3 Functional Annotations

Value Algorithm Source
Low density lipoprotein receptor n=1 Tax=Philodina roseola RepID=B2L3I8_PHIRO similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 314.0
  • Bit_score: 186
  • Evalue 4.90e-44
Low density lipoprotein receptor {ECO:0000313|EMBL:ACC43940.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 314.0
  • Bit_score: 186
  • Evalue 6.90e-44

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Taxonomy

Philodina roseola → Philodina → Philodinida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 897
ATGTTCGGTTGGAAACTTCTCATTTATTTAACATTTCTATATTCGATTAATGCAGAATTTCAAGTTAATATGTATTATACAGATGACTCGAATCAAATTCAAAATCTTACACAAACCAACTGTTTACGTCTACTTTTCAGAACAAATGGTATGTTACGAAAATTCGTTTTTTGTTTAAGTGATTTACCATCAACACTTAAAATCGAACCAAGTAATTCAATTAAAACTTATACTTTTCAACAATTGAAAAAACAAAATATAACTTCTGAACATTTATACTTGTGGTCAACACCGATTGATATCATCGAACAATATCAACTCTATTTAAATACAAACAGTACAAGTTTAGCTAAAAAAATATTCTACAAATGTATTTTACCAAGATTCGGTCCTCAATGTCAATATCAACTTATGTTTTATGATCTCCAACAATCATCTCTTTATGAAAATATCGAGACAGGTTTTGAAGGACGCGACCAAAATGCACGACCTTTTACAATGACTTGTTATGATCATTTCGAATGTCATCGAAGTAACCCGTACACATGTTTAGATTGGACTGAAATTTGTGATGGTCATATCGATTGTTTAAATGATGGAATCGATGAAAAAGATTGTTGGCAATTAGAACTCAATCAATGTAATCAAAATGAATATCGATGTTCAAATGGTGAATGTATATCGATATTATTTGGTAGACACGATAGGAGGGCTTTATTCTTTGATTGTTTTTATCACGAGGTTATTGCTCACGAGATACAATACGGCCTTAGTATGTGTAATTTAAGGTATCATTCATTTGATAGATGTGATGATATTACATGTCCATATTCACCTCTAACAAGTTCTTGTTCAAGAGATCGTCAGTATTATATATTTATGACGATGCATATCAAT
PROTEIN sequence
Length: 299
MFGWKLLIYLTFLYSINAEFQVNMYYTDDSNQIQNLTQTNCLRLLFRTNGMLRKFVFCLSDLPSTLKIEPSNSIKTYTFQQLKKQNITSEHLYLWSTPIDIIEQYQLYLNTNSTSLAKKIFYKCILPRFGPQCQYQLMFYDLQQSSLYENIETGFEGRDQNARPFTMTCYDHFECHRSNPYTCLDWTEICDGHIDCLNDGIDEKDCWQLELNQCNQNEYRCSNGECISILFGRHDRRALFFDCFYHEVIAHEIQYGLSMCNLRYHSFDRCDDITCPYSPLTSSCSRDRQYYIFMTMHIN