ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_30531_2

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 1059..1739

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat containing protein-like protein n=1 Tax=Philodina roseola RepID=B6S356_PHIRO similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 221.0
  • Bit_score: 193
  • Evalue 3.00e-46
TPR repeat containing protein-like protein {ECO:0000313|EMBL:ACI90376.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 221.0
  • Bit_score: 193
  • Evalue 4.20e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 181.0
  • Bit_score: 121
  • Evalue 3.20e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Philodina roseola → Philodina → Philodinida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 681
ATGTTGCCAACATTAGTGATTCGTATTGGCAAAATAGAAAAATTTTCGGATAAACCGCAAATCTGGGAAGCAGAATTAACCTTGACTGATGATAATGATTCACAATTACGTGAATTGTCTGAAACCATTCAGAAAGAAACTTCAGGTAGTACAGGATGGAATCGTCTCGGTCAATTGCTGATAAAATTAGCAAAGTTTGACAAAGCAGAAGCACTATATGAAATTCTACTAAAACAAACAACGGATCAAAAGGAAAAAGCAAACATATTCCATCAACTTGGCCTTACTAACAAGCATCGGGGCGAGTACTCGAAAGCACTTGAATATTATGAAAAATCACTTGAAATCGACAAAAAAACTCTTCCTGCAAATCATCCTTTGTTGGCTACTTCATACAACAACATCGGATCGGTGTATTACAGCATGGGCGAGTACTCGAAAGCACTTGAATATTATGAAAAATCACTTGAAATCAGGAAAGAAACTCTTCCTGCAAATCATCCAGATTTGGCTCAATCATACAACAACATCGGATGGGTTTATAGAAACAAGACTGATTACAAGAAGGCGCTGGATTATTATGAACGTGCTTTGGATATTTGGCAACGTTCATTACCCTCAAATCATCCAAATATTCAAGATGTGAAAGAGAGCATTGATTTCGTAAAAAAGAAGCTGTAA
PROTEIN sequence
Length: 227
MLPTLVIRIGKIEKFSDKPQIWEAELTLTDDNDSQLRELSETIQKETSGSTGWNRLGQLLIKLAKFDKAEALYEILLKQTTDQKEKANIFHQLGLTNKHRGEYSKALEYYEKSLEIDKKTLPANHPLLATSYNNIGSVYYSMGEYSKALEYYEKSLEIRKETLPANHPDLAQSYNNIGWVYRNKTDYKKALDYYERALDIWQRSLPSNHPNIQDVKESIDFVKKKL*