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scnpilot_expt_750_bf_scaffold_38339_1

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: comp(56..1687)

Top 3 Functional Annotations

Value Algorithm Source
Recombinase n=1 Tax=Rhizobium lupini HPC(L) RepID=K5C1U2_RHILU similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 305.0
  • Bit_score: 424
  • Evalue 1.90e-115
  • rbh
Site-specific recombinase and resolvase superfamily protein {ECO:0000313|EMBL:KDR89881.1}; Flags: Fragment;; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 560.0
  • Bit_score: 734
  • Evalue 9.40e-209
Resolvase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 506.0
  • Bit_score: 257
  • Evalue 6.80e-66

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
TATCAACTCCGCCCTGGCATCCAGAGCCTGATGGCGCATGTGAAGCGCGAGCGCATCGATGTCGTGCTTTGCGTCACGGTCGACCGCCTGTCGCGCGACATCGAGCACAGCGCCAAGATCCTCAAGGAACTGCGCTATCGCGATGCCGACATCTGGACCGTCCATGCCGGCACGCCGGTCACCGATCTTGAGATGGCGCTCAGAGCCGCACTCAGCCATGAGCTCGTCGAGCAGATCCGTTACCGCACCCGCGAAGGCATGAAGACCGCGGTGAAGAAAGGCAAGGCATCGACCTGCCTCGCTTACGGCTACAAGCTGTCGCAGCAGCGCGATGCCAATGGTGACCGCATCCGGGGTCTGCGGGATGTCGATCCGGTCAAGGCGGAGATTGTTCGTCGCATCTATCAGCTCTATGCCGACGGGATGTCTCCGCGCGACATCGCGCACCTCCTCAACAATGAAGGCGTCCCCGGCCCGCGCGGCCGCAAGTGGCGCGATACGGCAATCCGCGGCCATGTCCGCCGTGGCAGCGGCATTCTCAACAACGAGAGCTATATCGGCCGCATCGTCTGGAACAGGCGCCAGTACCGCAAGAATCCGGAGACCGAACGACGAACCGCCCGTGCCAACGACGCCACCGAGTGGGTGTTCAAGGAAGTCCCGGAGATGCGCATCGTATCGGATGAGCTGTGGCAGCGCGTCAAGGATCGGCAGAGGCAAGTGGGCGAGCTGTTCGATTTCGGGCAGAGCAACCGGCTCAATGCGACGCACCGGCCGGAATATCTCTTAAGCGGCATGCTCGAATGCGCGGAATGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCACGAACTGGAAGAGCGCGTCCTCAACTGCATTCCGGCAGCCTTCTACTCGCTCGATATCTTCGACCGGATTTCGCAGAAGTTGGTCGCGCACGAGGTGAGCAAGCTGAAGAGCGCTCCCTCCCGGAAGAACCAGTTGACCGCCGAGCTTGCGACCGTCAAGTCGCAGCAGGCAAGCCTGATGCAGCAGATCCAGGACCGGAATGCCGAAGGCCGGCCGCGTCTTGCGATCCTCGACGACCACCTCGATGAGCTTGAAGTCACCCGTGAGAAGCTGGTCATGGAACTGGCCGCGGCCGAAGAGCCCGCCGCGGAGGATTTTCAGGAGAAGATCGCCAGGCTGAAGGCTCAGTTCAATGCGGCCAACACCGAGATCGCCATCCGCAAGCTTCTCTTCCTTGCCCGCAACAATGCCGACGAACAGGCCAAGCGCCGGCTAATGCCGATCGTGCGGGACCTGATCCAGACGGTCGTCATCGGCAAGACGCCGGGTCACCAGCCGGCATCCCTGCAGGTCCATGGCGACATCGCCAACATCATGGCCTCGATGGATGTGATCGACATCATGCAGCAGCAGTTCGTCGCCGCCGCCCAGAACGATCTCCTGGCCCGGATTGCGTCGGGTGAGATCGACACGGAGCACAAAAAGAAAAAGCTCCTCGAGGCTTATGCCGAGGAGCTTTTGCGCAAATATCCCGAATGGGAGAATTTGCAAATGTCGGTGGTTGCGGGGGCAGGATTTGAACCTGCGGCCTTCAGGTTATGA
PROTEIN sequence
Length: 544
YQLRPGIQSLMAHVKRERIDVVLCVTVDRLSRDIEHSAKILKELRYRDADIWTVHAGTPVTDLEMALRAALSHELVEQIRYRTREGMKTAVKKGKASTCLAYGYKLSQQRDANGDRIRGLRDVDPVKAEIVRRIYQLYADGMSPRDIAHLLNNEGVPGPRGRKWRDTAIRGHVRRGSGILNNESYIGRIVWNRRQYRKNPETERRTARANDATEWVFKEVPEMRIVSDELWQRVKDRQRQVGELFDFGQSNRLNATHRPEYLLSGMLECAECGXXXXXXXXXXXXXXXRHELEERVLNCIPAAFYSLDIFDRISQKLVAHEVSKLKSAPSRKNQLTAELATVKSQQASLMQQIQDRNAEGRPRLAILDDHLDELEVTREKLVMELAAAEEPAAEDFQEKIARLKAQFNAANTEIAIRKLLFLARNNADEQAKRRLMPIVRDLIQTVVIGKTPGHQPASLQVHGDIANIMASMDVIDIMQQQFVAAAQNDLLARIASGEIDTEHKKKKLLEAYAEELLRKYPEWENLQMSVVAGAGFEPAAFRL*