ggKbase home page

scnpilot_expt_750_bf_scaffold_751_29

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_66_490

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(32449..32556)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5D8_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 35.0
  • Bit_score: 71
  • Evalue 2.80e-10
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 35.0
  • Bit_score: 71
  • Evalue 7.60e-11
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 35.0
  • Bit_score: 71
  • Evalue 3.80e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 108
TTCGACGTGACGCGCGAGCGCATCCGCCAGATCGAAGCCAAGGCGCTGCGCAAGCTCAAGCACCCAAGCCGCAGCGACAAGCTGCGCAGCTTCATCGATTCGCTGTAA
PROTEIN sequence
Length: 36
FDVTRERIRQIEAKALRKLKHPSRSDKLRSFIDSL*