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scnpilot_expt_750_bf_scaffold_5716_12

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 8442..8942

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 160.0
  • Bit_score: 105
  • Evalue 6.10e-20
RHS repeat-associated core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 160.0
  • Bit_score: 105
  • Evalue 1.70e-20
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEV99381.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nia similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 160.0
  • Bit_score: 105
  • Evalue 8.50e-20

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 501
ATGTACCGCGTAAACTCGGGCACCAATAAAATGGGACTGGGTATCACATTAAAAGTAATGGCGGGAGACAAGGTGGATGTGTTTGGCAAAAGCCACTGGTATACACCGAATACCTCTGGTTCGCCTAATGTGGCACCGGTGGTGCTGGATATCTTGTCCGGTTTACTCGGTGCACCCGGGAGTGCTGCTGCCGGTAAAGCGACAGCCAGCCAGTTGAATGCGATCACGGACATTACCACGCCGCTGGGCGCCTTTATCAATGATCCCAACCGCGATAATGCCTCTTACCCGCAGCGCCTCAAAGCGTTCATAAACTACATGTTCTTCGACGAGCAATTTAAGATGGTCAGCGGTGGTGCCAGCCCCGTGAATCCCACGGGTTTTATCAAAGACCATTTCAGTGATCTGCAGAACCTGGCTGCCACCAAAAATGGTTATCTTTATGTCTATGTAAGTAATGAGAGTCCGCAACAGGGAATAAGACTAATAAGAAATACTTAG
PROTEIN sequence
Length: 167
MYRVNSGTNKMGLGITLKVMAGDKVDVFGKSHWYTPNTSGSPNVAPVVLDILSGLLGAPGSAAAGKATASQLNAITDITTPLGAFINDPNRDNASYPQRLKAFINYMFFDEQFKMVSGGASPVNPTGFIKDHFSDLQNLAATKNGYLYVYVSNESPQQGIRLIRNT*