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scnpilot_expt_750_bf_scaffold_1975_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(1448..3550)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase id=12498631 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 647.0
  • Bit_score: 939
  • Evalue 2.30e-270
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 649.0
  • Bit_score: 821
  • Evalue 2.60e-235
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain {ECO:0000313|EMBL:AAZ97364.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 649.0
  • Bit_score: 821
  • Evalue 1.30e-234

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2103
ATGAAATTCAGACCACGGCCGATCACACCGCTTTTTTTATCGAGCACAAGCACGTGGAGCGAAGGGGAATCAGCCATTAAAAAAGGTGCGGTCGTACCCGAGAGCTTGTTCACTGCGACGCCGGCGGCAAAGACCCCGCCCTTGCAGCGGATCAGCGCGATCCTGGATCGAGAAACGATCGCGTGGGTCGTACTGGGGATTACGCTGTTTCTGACTATCGCCTTGTGGCGTTATTCCGAGACGGAGTTTGCCAGGCGGGCAAACGAAAGTTTCGAGAATGACGCCAGAAAACAGGAAACCCTCCTGCTCGGCCGCATGCAGGATTACGAGCAGGCGCTGCGCGGCGGTGCTGCCCTTTTTGCCGCGAAAAGCCGGGTTAGCCGCGCGGAATGGCACGCCTATGTCGAGATGCTCCAACTCGACAACGGCCTCCCCGACATCCAGGGCACCGGCTTTTCCCTCATGGTCCCCAAGGAGGCGAAGCAAGGACACGAGCGCAGCGTGCGTGCGGAAGGATACCCCGCCTACACCATCCATCCGGCCGGCGACCGCACGATTTACAGCAGCATCGTTTATCTCGAACCCTTCAGCGGGCGAAATTTGCGCGCGTTCGGTTATGACATGTTTTCCGATCCAGTTCGCCGCGAGGCTATGGAGCGTGCACGTGATAGCGGCAATCCTGCCCTGTCGGGAAAGGTCACGCTCGTTCAGGAAACGGGGCGGCAGAACCAAGCCGGTTTCCTGATGTATCTACCGGTTTATCGCAACGGGATGCCGCACGACAGCGTGGCCGCACGACGGCGTGCGTTGCTCGGCTTCGTCTACAGCCCGTTCCGGGTGGACGATCTGTTGAACAGGGTATTTGGCGACGCTGAGCGGGAAGTTGAAATCGAACTGTACGACGATCAGCCGAGGCCGGAAAACCTGCTCTTCGCCTCCACCGGTTCTGCGCATGTTTCTCGCTATGTGACCGACAAGGTTTTGCAGATCGGCGGCCATCGCTGGACGGCGCGCTTCAAGAGCAATTCCGTATTCGAATCGAGAACGGAAAGCGCCCAGCCCCGCATGATTCTTTTCGGCGGTCTGGCGCTCGATCTGCTGTTTTTCTCGGTCCTCTATATGAATGCGCGACATCGCCGGGCGATGCGCGATGTGGCGGAAAAACTCGAAACCAGCCTCGACAGCTTCAAGGCCCTCGTCGAAAACGTCCCCGGGGCCGTGTTCCGGGCTGAGGTAGGATCATCTTCGCCGGTGCAGCAACTCAGCATTGGTATCCAGGCACTCACGGGCGAGCCGCCGGAACGCTTTGTTTCCGGAGCGGTTTCCTATATCGATTTCATCCACCCGGATGACCGACTCATGGTGAGCCAGGCGATTTCCGAAGCGATTGCCAAGCGGAGTATTTACAACATCGAATATCGCATCAGAACCGCCGATGGATTCCCGCGCTGGGTCAGCGAACGAGGCCGCGTCACGTCGGACCATGACGGCCGGGCGCGATGGCTGGACGGCGTCATACTGGACATCACCGAGCGCAAGACCGCCGAAATCATGATTCGCGACTTCGCCTACAACGATCCGCTGACCGGACTGCCCAACCGCCGTCTTTTGCTGGACCGCCTCGAGCATCAACTCGCAGCCAGCAGCCGTAGCGGAAGGTACGGCGCCCTTCTGTTCATCGACATGGACAATTTCAAAATCATCAACGACACGCTTGGCCACGAGGCCGGCGACCGGGTGCTCGGTGAGGTGGCGCGGCGCCTGCTCGCCAGCGTCAGGGAAAGCGACACCGTGTCGCGCCTGGGTGGCGACGAATTCGTCATCATCCTCGACAACCTGGGCGACACGGCGTCCGCGGCCGCCGTGGAGGCAGGCGAGCTGGGCCACAAGATCCTGACCAAGCTCGCACGGCCCTACCGGCTCGGCGAACAACTCTGCATCAGCACACCCAGCATCGGCATCGCCACGTTCTGCGGTCATGCAACAAGCGCGGATCAGTTGCTCAGGCATGCCGATGAAGCCATGTACCAGGCCAAATCAGCTGGCCGCAACCAGTTGCATTTCTACGTGGATCCGCCCTGTGCAGCAGCACGTACCGGCTAA
PROTEIN sequence
Length: 701
MKFRPRPITPLFLSSTSTWSEGESAIKKGAVVPESLFTATPAAKTPPLQRISAILDRETIAWVVLGITLFLTIALWRYSETEFARRANESFENDARKQETLLLGRMQDYEQALRGGAALFAAKSRVSRAEWHAYVEMLQLDNGLPDIQGTGFSLMVPKEAKQGHERSVRAEGYPAYTIHPAGDRTIYSSIVYLEPFSGRNLRAFGYDMFSDPVRREAMERARDSGNPALSGKVTLVQETGRQNQAGFLMYLPVYRNGMPHDSVAARRRALLGFVYSPFRVDDLLNRVFGDAEREVEIELYDDQPRPENLLFASTGSAHVSRYVTDKVLQIGGHRWTARFKSNSVFESRTESAQPRMILFGGLALDLLFFSVLYMNARHRRAMRDVAEKLETSLDSFKALVENVPGAVFRAEVGSSSPVQQLSIGIQALTGEPPERFVSGAVSYIDFIHPDDRLMVSQAISEAIAKRSIYNIEYRIRTADGFPRWVSERGRVTSDHDGRARWLDGVILDITERKTAEIMIRDFAYNDPLTGLPNRRLLLDRLEHQLAASSRSGRYGALLFIDMDNFKIINDTLGHEAGDRVLGEVARRLLASVRESDTVSRLGGDEFVIILDNLGDTASAAAVEAGELGHKILTKLARPYRLGEQLCISTPSIGIATFCGHATSADQLLRHADEAMYQAKSAGRNQLHFYVDPPCAAARTG*