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scnpilot_expt_750_bf_scaffold_3290_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(477..791)

Top 3 Functional Annotations

Value Algorithm Source
heavy metal efflux pump id=12497669 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 203
  • Evalue 1.00e-49
heavy metal efflux pump CzcA similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 104.0
  • Bit_score: 155
  • Evalue 9.10e-36
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 104.0
  • Bit_score: 155
  • Evalue 3.50e-35

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Taxonomy

RLO_Pseudomonas_59_9 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCTGCTGTACCTGAAGCAGGCCTGGCACAGGCGAATCACCGACGGCAACGAGACCGAGGCGACCCTGATCGACGCCATCCGCGAGGGGGCTGTCCTGCGCGTGCGGCCCAAGGCCATGACGGTGGCGGTCATCATTGCCGGCCTCATGCCAATTTTGATGGGCAGCGGCACCGGCAGCGAAATCATGAGCCGCATCGCCGCGCCCATGGTGGGCGGCATGATTACTGCGCCACTGCTGTCCCTTTTCGTGATTCCGGCTGCGTACCGGCTGATGCGGCGCCGCAACTTTGCGAACAAATCTGTATTTCCTTAG
PROTEIN sequence
Length: 105
MLLYLKQAWHRRITDGNETEATLIDAIREGAVLRVRPKAMTVAVIIAGLMPILMGSGTGSEIMSRIAAPMVGGMITAPLLSLFVIPAAYRLMRRRNFANKSVFP*