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scnpilot_expt_750_bf_scaffold_3290_4

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(5025..5933)

Top 3 Functional Annotations

Value Algorithm Source
CzcC family heavy metal RND efflux outer membrane protein id=12498617 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 303.0
  • Bit_score: 549
  • Evalue 2.90e-153
CzcC family heavy metal RND efflux outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 302.0
  • Bit_score: 485
  • Evalue 1.10e-134
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 302.0
  • Bit_score: 485
  • Evalue 5.50e-134

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GCGCTGAGCGAAGCGCAAATCCGCATTACCCGCCTCACCGTGTTGCGGGAAACGGCGGCAGCATGGATTGCGCGCGATACGGTCGAACACCAGCTCGCGTTCATCGATGGGCTGTACGGCGAGAACCGCCTGTTCGATGCTGCGGTGCGTGCACGCATAGCCGGGGGCAAGGGCAGTGCGATGGAGGCAGTGTCTGCGCGCCAGGAGGCTGCAATGATCGACGCGCGGCGAGATGAACTCGTCGCGCGCCGCCAGCAATCCATCGCTGCGCTCAAACGCTGGGTAGGCCCACGCGCGGATGCGCCACTGGAGGGCGCCGCGCCCGACTGGCCAATCGCCCATGATGCGCTGGCCCATGCGCTGCACCGGCATCCGGAACTGGCGATATTTGATCCCAAGGCACAAGTGCTGGACGCCGAAGTAGCCGAAGCTCGCGCGGACAAGAAGCCGGACTGGGCGCTGGAGCTGGCGTACCAGAAGCGCGGCGCGCAATTCGGCGACATGGCCACTGTGCAGGTGAGTTTTGATCTGCCGGTGTTTGCCGCCACCCGGCAGGACCCGAAAATTGCTGCCAGGCTTGCCGAACGAGAAGGACTCGACGCCGAACGCGAAGCGGTGATGCGCGAACATGCGTCGATGCTGGAAGCGGATTTTGCCGAGTACCAGCGCCTCGACAAGGCCGTCAGGCGACAGCGCGAGGTGTTGCTGCCGCTGGCCGGCGAGAAAGTGAATCTGGCTTTGGCTGACTGGCGCGGTGGCAAAGGCGAACTCGTCAATCTGGTGATGGCGCGGCGCGAACGCATTGATGCCGAACTCATGGCCATCGCGCTCGAAGGCGAGCGCAAGGAGGTGGCTGCCCGCCTTCATTACGCCTATGGCGAACCCACTTTGTCCGGAGAAAAACAATGA
PROTEIN sequence
Length: 303
ALSEAQIRITRLTVLRETAAAWIARDTVEHQLAFIDGLYGENRLFDAAVRARIAGGKGSAMEAVSARQEAAMIDARRDELVARRQQSIAALKRWVGPRADAPLEGAAPDWPIAHDALAHALHRHPELAIFDPKAQVLDAEVAEARADKKPDWALELAYQKRGAQFGDMATVQVSFDLPVFAATRQDPKIAARLAEREGLDAEREAVMREHASMLEADFAEYQRLDKAVRRQREVLLPLAGEKVNLALADWRGGKGELVNLVMARRERIDAELMAIALEGERKEVAARLHYAYGEPTLSGEKQ*