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scnpilot_expt_750_bf_scaffold_4471_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: 1608..2942

Top 3 Functional Annotations

Value Algorithm Source
Hrp-dependent type III effector protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003722487 similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 444.0
  • Bit_score: 840
  • Evalue 7.10e-241
  • rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 443.0
  • Bit_score: 842
  • Evalue 2.60e-241
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 444.0
  • Bit_score: 698
  • Evalue 9.40e-199

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAGCCCCAAGATCGTCGTTCTCGACGACGATCCCACCGGCTCGCAGACGGTGCATTCCTGTCTGCTGCTGACGCGCTGGGATGTCTCCACGCTGAAGACGGCGCTGGCCGATGCGGCGCCGCTGTTCTTCATCCTCACCAATACGCGCGGGATGGATGCGGAACGCGCGGCCACCGTGACGCGCGAGGTGTGTGAAAACCTCAGGCTCGCGCTCGCCGATTTCCCCGGACCGGTCCTGTTCGTGTCCCGCTCGGATTCCACCCTGCGCGGCCACTACCCGGTGGAGACCGACGTGATGAACGCCGTGCTCGGACCGTTCGACGCGACGCTGCTGACGCCGGCTTTTTTCGAAGGCGGCCGCATCACGCGGGACAGCACGCATTACCTGATGGTCGACGGCAAACCGGTGCCGACCCATGAGACCGAGTTCGCGCGCGACTCGGTGTTCGGCTATCGCACGGCGTATCTGCCGGACTATGTCGCCGAGAAGACAAATGGTCGCGTGGCATCCGATTCGGTACGGCGCCTGACGCTGGCCGATCTGCGCACAGGACAGGCGGACACCTGGCTGGCGGCGCTGAACGATAATCAAGTGGGGGTGATCGACGGCGAAACGACGGACGACTACCGGCTGTTCGCCGACGCTGCGCTGAAGGCCGCGGCCGGCGGCAAGCGATGGCTGTTCCGCAGCGCCGCTTCGCTGCTCACCGCGTTGGCGAAGCTGCCACCGCAGCCGGTGGCCGCCGAAGCCTTTTCCACCCTGGTGCGCGACCGTCAGCCTGGCGCGGTCGTGGTCGGCTCGCACGTCGCCAAGACCACCGCACAACTCACCGCGTTGCTGAAGGAGCGCGGCGTGGTCGGTCTGCCGCTCGACGTTGCCCGCCTGCCCGACGCGCGCGCCGCGGTGGTCGACGAACTCACCGCCGGCATCGCCCACGCCCACGCACGGGGCCTCACCCCGGTGGTGTTCACCAGCCGTAGCGAGCGGCAATTCGCCAACATTGTAGAGCGCCTGGCGTTCGGCGAGTCGGTGTCGGGCACGCTGATGGACGTGGTGAAACGACTGCCGGACACGCTCGGCTTTCTCATCAGCAAGGGCGGCATCACCTCCAACGACGTACTGTCGACCGGGCTGGCGCTGACCGCCTCGCGCGTGCTGGGGCAGATCCTACCCGGCGTCACCGTGGTGCAGACGCCGCCCGACCACCGCTTGCCGCAGTTGCCGGTCGTCATCTTTCCCGGCAATGTCGGCGGCGACGGCGCGCTGGCGGAGGCCTATCGACGACTCGCACCCTCGCACGCGCAGGCAAGCCCGGCTACACTCGCAGCCTGA
PROTEIN sequence
Length: 445
MSPKIVVLDDDPTGSQTVHSCLLLTRWDVSTLKTALADAAPLFFILTNTRGMDAERAATVTREVCENLRLALADFPGPVLFVSRSDSTLRGHYPVETDVMNAVLGPFDATLLTPAFFEGGRITRDSTHYLMVDGKPVPTHETEFARDSVFGYRTAYLPDYVAEKTNGRVASDSVRRLTLADLRTGQADTWLAALNDNQVGVIDGETTDDYRLFADAALKAAAGGKRWLFRSAASLLTALAKLPPQPVAAEAFSTLVRDRQPGAVVVGSHVAKTTAQLTALLKERGVVGLPLDVARLPDARAAVVDELTAGIAHAHARGLTPVVFTSRSERQFANIVERLAFGESVSGTLMDVVKRLPDTLGFLISKGGITSNDVLSTGLALTASRVLGQILPGVTVVQTPPDHRLPQLPVVIFPGNVGGDGALAEAYRRLAPSHAQASPATLAA*