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scnpilot_expt_750_bf_scaffold_7956_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: 853..2964

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Thiobacillus thioparus RepID=UPI00036F623A similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 659.0
  • Bit_score: 1302
  • Evalue 0.0
  • rbh
organic solvent tolerance transmembrane protein; K04744 LPS-assembly protein Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 675.0
  • Bit_score: 1105
  • Evalue 0.0
organic solvent tolerance transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 674.0
  • Bit_score: 1029
  • Evalue 0.0

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
TTGTCCACCTTGCCCGGCTTTACGCTCGTTGTCCTGTTGCTGACTGCCGGTTCCGCGGCGGCGGACGGGCTCGTTCTGAAGAAGGACGTCGAACTGAAAGGCTCGACGGCGGCGGGCAAGGCGGGGCCGCTCTTCCTCACTGCGGACAAGATCGAATCGACCGCTCCCGATGTCATCGAAGCCAGCGGCAAGGTGGCGGCCCGCCAGGCCGGACAGAATTTCTTCGCCGACTGGCTGCGCTACGACACCACGCAGAATCGGGTGGAAGCCCGCGGTCGGGTTCGCCTGGAACAGCCCGCGCTGTTGGTGGATGGCGATGCGCTCGAACTCGACCTGGACGACTACAGCGGCGAACTCGCCCAGCCGGTCTATCATCTGGTCGCGCAGCATGGCCGGGGTGACGCCAGCCATATCGACTTCGTCGACAAAGAGCACTACAAGCTGCAGGAGGCCACCTACACGACCTGCCCGGTGGACAACGACGACTGGTTTCTCGAGGTGGACGATCTCGACATCGACAAGAGCCGCAACGTGGGAACGGCACGCAATGCCTCGCTCCATTTTCTCGGCGTGCCGATCCTGTATACGCCCTGGATGGATTTCCCGCTCAACGACGTGCGCAAGAGCGGCGTGCTGGCCCCCACCTTCGGCACCACCCAGCGCAGCGGCGTCGACTTCCTGGTGCCCTACTATCTCAACCTCGCACCCAACTATGACGCCACGCTGTATCCGCGCCTGCTGTCCAAGCGCGGCGTGCAACTCGGCGGCGAATTCCGCTATCTGTTGAACGACGTCCATGGCGTGAACCGCCTGGAGTATCTCCCCAACGACAATGTCGCAGGCCGCTCTCGCTGGAGCGCCGCGTTGAACAACATCTACCGCCTGAACGACACGACCGAAGCCGGCATGCTGTTCAACCGCGTGTCCGACAACGATTATTTCCGCGACCTGTCCAATCTGCTGGCCGTCACCTCGCTCACCCAGCTCAACCGCGAATTCTGGGTGACCACCCAGCATACAAACTGGAGTGCGGATATTCGCGCACAAAGCTACCAGACCCTGCAGGACTCCACCTCCGCCACGCCCATCCTCGAACCTTACGCACGGCTGCCGCAGGCGCGCCTGGGCATCTCGAAAACGTTCGAGAACGGGCTGGAATTCAAGATGGACAGCGAAGCCACCCATTTTGCCCACCCCACCATGGTCGAAGGCACGCGGGTACTGGCCTATCCCACGCTGCGCCTGCCGCTCACCAACTCGTTCGGGTTCCTCACGCCGCAGATCGGCTGGCACAGCACCTACTATGCGCTGGACGATCGCGCACCGGTGCAACACATCAGCCGCAGCCTGCCCATCCTCAGCCTCGACAGCGGCGTGACCTTCGAGCGTCCGTTCCACTTTGCCAGCCAGGATTACACGCAGACACTGGAACCGCGCGCCTACTATGTCTACGCGCCCTACCGCGACCAATCGAATATTCCGGTATTCGATACCGCGCTGCTGGATTTCAGCTACGCGCAAATGTTCACCGAGAACCAGTTCATCGGCGGCGACCGCGTCAACGACGCCAACCAGCTGACGGTGGCCGTCACCAGCCGGTTCGTCGAGGCGACCAGCGGGCTGGAACGGCTGCAGGTCACCCTCGGCCAGCGCTATTATTTCAGCACGCAGCAGGTCACCCTGCCCGGCATTGCGCCGCGCACCAGCAATGCCACCGACCTGCTGGCCGCCATCAGCGGACAGGTCACGCGCAACTGGCGCATCGACACGGCATGGCAGTTCGACGCCCAGAACGGCACCACCATCCGCCAGAATCTTGGCGCGTCCTATCGGCCCAGCCCCGGCCGCGTGTTGAACCTGGGTTACCGCTTCATCGATCAGACCACGGAACAGGTCGACCTGTCCGCGCAGTGGCCGCTCGCCCAGCGCTGGTACGGCATGTTCCGCTACAACTATTCCTTCAAGGACAACAAGCTGAACCAGTCCACCGATGCGTTGTTCTTCCAGCTGGAGTTGAACGGAATGGGGCGCATCGGCTCTAATCCGCTCGACGTTTTGAAACATAGTGTTCCCGGATACAGGCCTAGCAATGAAATTATTCAAACGCCCTGA
PROTEIN sequence
Length: 704
LSTLPGFTLVVLLLTAGSAAADGLVLKKDVELKGSTAAGKAGPLFLTADKIESTAPDVIEASGKVAARQAGQNFFADWLRYDTTQNRVEARGRVRLEQPALLVDGDALELDLDDYSGELAQPVYHLVAQHGRGDASHIDFVDKEHYKLQEATYTTCPVDNDDWFLEVDDLDIDKSRNVGTARNASLHFLGVPILYTPWMDFPLNDVRKSGVLAPTFGTTQRSGVDFLVPYYLNLAPNYDATLYPRLLSKRGVQLGGEFRYLLNDVHGVNRLEYLPNDNVAGRSRWSAALNNIYRLNDTTEAGMLFNRVSDNDYFRDLSNLLAVTSLTQLNREFWVTTQHTNWSADIRAQSYQTLQDSTSATPILEPYARLPQARLGISKTFENGLEFKMDSEATHFAHPTMVEGTRVLAYPTLRLPLTNSFGFLTPQIGWHSTYYALDDRAPVQHISRSLPILSLDSGVTFERPFHFASQDYTQTLEPRAYYVYAPYRDQSNIPVFDTALLDFSYAQMFTENQFIGGDRVNDANQLTVAVTSRFVEATSGLERLQVTLGQRYYFSTQQVTLPGIAPRTSNATDLLAAISGQVTRNWRIDTAWQFDAQNGTTIRQNLGASYRPSPGRVLNLGYRFIDQTTEQVDLSAQWPLAQRWYGMFRYNYSFKDNKLNQSTDALFFQLELNGMGRIGSNPLDVLKHSVPGYRPSNEIIQTP*