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scnpilot_expt_750_bf_scaffold_9843_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: 279..767

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Thiobacillus thioparus RepID=UPI0003761A99 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 186.0
  • Bit_score: 271
  • Evalue 4.80e-70
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 186.0
  • Bit_score: 277
  • Evalue 1.60e-71
greB; transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 168.0
  • Bit_score: 248
  • Evalue 9.40e-64

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGAACAAGGCATTCGTCAAGGAAACCGACGCACCGGATGCGGACGAGGACGAGATCGATGCGCCCGCGCTCCCCGCCGGGTCGAAGAACTACATGACGCCCGCGGGCTACGCGCAGCTCGATGCCGAATTCAACCAGCTGTGGAAAGTCGAACGCCCCAAACTGGTGGAAACCATCTCGTGGGCGGCCAGCAACGGCGATCGCTCCGAAAACGGCGACTACATCTACGGCAAGAAGCGTCTGCGCGAAGTCGATCGACGCATCCGCTTTTTGTCCAAGCGCCTGGAGCACGCCGATGTCGTCGACCCAGCCACCCGCGAGGACACCGACCAGGTGTTCTTCGGCGCCACCGTCACGATCGCGGATGAAGACGGCAGCGAATCCACCTTCGCCATCGTCGGCATCGACGGCGACACCGTCAGCGTCCAGACGCCCGAAGGACGGCGCGAAGTCGACATCGTCGCGGTACGCTACCAGGCTATCGATTGA
PROTEIN sequence
Length: 163
MNKAFVKETDAPDADEDEIDAPALPAGSKNYMTPAGYAQLDAEFNQLWKVERPKLVETISWAASNGDRSENGDYIYGKKRLREVDRRIRFLSKRLEHADVVDPATREDTDQVFFGATVTIADEDGSESTFAIVGIDGDTVSVQTPEGRREVDIVAVRYQAID*