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scnpilot_expt_750_bf_scaffold_10829_2

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(930..1256)

Top 3 Functional Annotations

Value Algorithm Source
ribosome-binding factor A; K02834 ribosome-binding factor A id=12495472 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 200
  • Evalue 7.00e-49
ribosome-binding factor A similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 1.30e-48
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 105.0
  • Bit_score: 198
  • Evalue 6.30e-48

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGCCGAAGGACTTTCCCAGAGCACGCCGCGTCGCCGACCAGATCCAGCGCGAACTGCCGGAATTGATCCGGCAGGAAGTGAAGGATCCGCGCGTCGGCATGCTGACCATCACCGAGGTGGAGGTCAACCGCGACATGGAGTTCGCCAAGGTCTACTTCACCACGCTGGGCGGCCAGGCCGAGCATGACGCCTGCCTGCAGGGCCTGCAGCGCGCCAGCGGCTTCCTGCGGTCGCAGCTGTCGCACCGCATGCAGCTGCGCGTGGTGCCCAAGCTGACCTTCGTCTACGACCGTTCGGTCGGATCGTCGATGGCGTGCTGCTGCTGA
PROTEIN sequence
Length: 109
MPKDFPRARRVADQIQRELPELIRQEVKDPRVGMLTITEVEVNRDMEFAKVYFTTLGGQAEHDACLQGLQRASGFLRSQLSHRMQLRVVPKLTFVYDRSVGSSMACCC*