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scnpilot_expt_750_bf_scaffold_22010_3

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(1841..2374)

Top 3 Functional Annotations

Value Algorithm Source
fdoI; formate dehydrogenase O subunit gamma (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 201.0
  • Bit_score: 208
  • Evalue 2.00e-51
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367FEEF similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 205.0
  • Bit_score: 261
  • Evalue 5.40e-67
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EJM60524.1}; Flags: Precursor;; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 199.0
  • Bit_score: 208
  • Evalue 7.60e-51

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Taxonomy

Pseudomonas sp. GM48 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCACGATGATTCAACGCTACAGCGCGCGGGAACGCAGCAACCACTGGGTGGTGGCGATTGCCTTCATACTTGCCGGCCTCTCGGGACTGGCGCTGTTCCACCCGGCCTTTTTCTTTCTCACGAACCTGTTCGGCGGCGGCCCCTGGACGCGCATCCTGCATCCCTTCATCGGCGTGGTGCTGTTCCTGTTTTTCATGGCGATGGCGGTGCGATTCTGGGGACGCAACCGCTTTATTCCCGCCGACCGCGAATGGCGGAAGCGCATCAAGGACGTGCTCTGCAACCGCGACCAGGGCCTTCCCGAAGTCTGGCAGCCGTGGTTCGCGCCGTTTTTCCCCATCGGACTGCTGCGCGTGGCGGTGGTCGTGCATGCCCTGGCAGCCTGGATCATGATCCTCGGCATCGTCGTCCACGTCTATGCGGCGATCTGGGTCAAGGGAACGGTCCGGGCGATGACGCGCGGCACGGTGTCGGCCGCCTGGGCGAAGCAGCATCACCGCGCCTGGTATCGCGAGATGACCGGCAAGTGA
PROTEIN sequence
Length: 178
MSTMIQRYSARERSNHWVVAIAFILAGLSGLALFHPAFFFLTNLFGGGPWTRILHPFIGVVLFLFFMAMAVRFWGRNRFIPADREWRKRIKDVLCNRDQGLPEVWQPWFAPFFPIGLLRVAVVVHALAAWIMILGIVVHVYAAIWVKGTVRAMTRGTVSAAWAKQHHRAWYREMTGK*