ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_704_14

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(16014..16361)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugation protein TraO n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDS4_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 230
  • Evalue 8.70e-58
putative conjugation protein TraO similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 230
  • Evalue 2.50e-58
Putative conjugation protein TraO {ECO:0000313|EMBL:ABM44399.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 230
  • Evalue 1.20e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAACAACGCCTCTTGGTCATGAACGGACAGCGGATCGTTCAGACCGAGCAAGAAGGGGCTTGGGCCAATCAGAAGGTTGATAAGGCGGGCGCGTTAAAGCCTGGCATCTACAACCTATACATGGCCCAGCAGGCCGACAAGAAGCAGACTCATGATGGCGTGATCGTTCATGCCGACAACAATCAGGTGTTCCAGCAGATCGGCAAGAACTTTGTCATGCACGCCCGGTCAGATTTCGATAAAGTACCTGAAATCGGGAGTGCGAAGAGCATCAGCTACAGCGCACAAGGCAAAGCAGTAGTTGCCGCCGAGGCCCCGAAACTCACGCGAGGCCGATCCCGATAG
PROTEIN sequence
Length: 116
MKQRLLVMNGQRIVQTEQEGAWANQKVDKAGALKPGIYNLYMAQQADKKQTHDGVIVHADNNQVFQQIGKNFVMHARSDFDKVPEIGSAKSISYSAQGKAVVAAEAPKLTRGRSR*