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scnpilot_expt_750_bf_scaffold_1476_14

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 10366..11265

Top 3 Functional Annotations

Value Algorithm Source
uspA2; universal stress protein uspA id=12493622 bin=THIO_HI species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 300.0
  • Bit_score: 557
  • Evalue 6.20e-156
  • rbh
uspA2; universal stress protein uspA similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 293.0
  • Bit_score: 215
  • Evalue 2.80e-53
Universal stress protein uspA {ECO:0000313|EMBL:ABV92167.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 293.0
  • Bit_score: 215
  • Evalue 1.40e-52

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Taxonomy

Dinoroseobacter shibae → Dinoroseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAATCGGATCAGACATGTCCTCGCTGCCGTGGACCGGTTTCCGCAGAACGATCCCGTGCTGGCGCGCGCCGCAGAGATTGCCCGTGCACATCAGGCGCGACTCACCATTGTTCATGTCGTCGGCCGCTTCGCCGGGTTCGATCCTGCGCTTGCGGACCCGGGCATGATCCAGCATCAAATACGCCTCATCGCCCGCGAAAACATCGAGGCCGCCATGGCAAGGCAGGCAATCGACATGCCCGGAGTCGATATTCGCATTGAGTCGGGATCGCCGTCCCTGCGCCTCGTCGATCTGGCCCATGAAACCCGGGCCGATCTGGTCGTGATGATGGCGCATCAGGGAGAGTCGATCCTGGCGAAAATCATCGGCTCGACGACCGATCGGGTGATTCGCGCAGCCTGTGCGCCGGTGCTGGTGGTCAAGCGGCCGGTCATGCAAGCCTATGAACGCGTGGTGGTGGCCGTGGATCCATCCGATGAATCCGGCGCGATCGTGACCTTCGTGGCCGCGCTGTTTCCGCTGGCGCGGCTGCGTCTGGTCCATGCGGTACAGATTTCATCGCAGTTCGAGGAGGCGATGCGGCGTGCGGGCCACGGACAGGCAAGCCTGGCGGCTCATCGCGATGCCCTGGTCCGCCAGGCGAAGGCCTGCCTGCGCGACCTCTCGGAACAACTGGCGCATCGGCCGGCGCGCAGTTCGACCTGGGTGGCCGTGGGCGATCCGGCGCAGCTTCTTGCCAGGACGACGCGGAATCCGCAGGTGGGTCTGATCGTGCTGGGTCCCGGCAGCCCGGACCTGATCCGGCGGGCGCTGCTCGGCAGCGTCACCCGCCGGGTGCTGCAAACCGCGGCCTGCGATGTGTTGATCTGTCCTGCCGCCGTCATTCATCGTGTTTGA
PROTEIN sequence
Length: 300
MNRIRHVLAAVDRFPQNDPVLARAAEIARAHQARLTIVHVVGRFAGFDPALADPGMIQHQIRLIARENIEAAMARQAIDMPGVDIRIESGSPSLRLVDLAHETRADLVVMMAHQGESILAKIIGSTTDRVIRAACAPVLVVKRPVMQAYERVVVAVDPSDESGAIVTFVAALFPLARLRLVHAVQISSQFEEAMRRAGHGQASLAAHRDALVRQAKACLRDLSEQLAHRPARSSTWVAVGDPAQLLARTTRNPQVGLIVLGPGSPDLIRRALLGSVTRRVLQTAACDVLICPAAVIHRV*