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scnpilot_expt_750_bf_scaffold_2003_3

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(1040..1369)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 id=12495297 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 130.0
  • Bit_score: 210
  • Evalue 6.80e-52
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 129.0
  • Bit_score: 192
  • Evalue 2.70e-46
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 129.0
  • Bit_score: 183
  • Evalue 4.30e-44

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCGTCATCGTCAATCCAACCGCAAGCTGAACCGCACCACCAGCCATCGTCTGGCCATGTTTCGCAACATGAGCGTGTCGCTGCTGCAGCACGAAGTCATCAAGACCACGCCCACTCTGGCGAATCATCGTCTGGCGTTCGACCGCCTGCGCGACCGTGAAACGGTCGTCAAGCTGTTCGGCGAATTGGGCCCGCGCTACAAGACCCGCCCGGGCGGCTATTTGCGCATCCTGAAATACGGCTTCCGGAATGGCGACAATGCACCCATGGCATTGGTCGAACTGGTCGATCGCCCGGATACCGACGCGGAGCCGGTCTCTGCCGAGTAG
PROTEIN sequence
Length: 110
MRHRQSNRKLNRTTSHRLAMFRNMSVSLLQHEVIKTTPTLANHRLAFDRLRDRETVVKLFGELGPRYKTRPGGYLRILKYGFRNGDNAPMALVELVDRPDTDAEPVSAE*