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scnpilot_expt_750_bf_scaffold_2003_5

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(2483..3112)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 210.0
  • Bit_score: 417
  • Evalue 7.00e-114
  • rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 209.0
  • Bit_score: 405
  • Evalue 5.00e-110
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 396
  • Evalue 3.60e-108

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTAATCTTGATCCCAAATGCCGCCAGTGCCGTCGTGAGGGCGAAAAGCTCTTTCTGAAAGGTGAGAAGTGCTTTACCGACAAATGTGCGATTGAACGTCGCGCCTACGCGCCTGGCCAGCATGGCCAGAAAAGCGGCGCGCGTCTGTCCGGTTATGGCGTGCAGCTGCGTGAGAAGCAGAAAATCCGCCGTATCTACGGCGTTCTGGAAGGCCAGTTTCGCCTGACCTACAAACGCGCGGAAGGCCGCAAGGGCGTAACCGGCGAAAACCTGCTGTCCATGCTGGAATCGCGTCTGGATTCGGTGTGTTACCGCATGGGCTTTGGCGCGTCGCGCACCGAGGCGCGTCAGGTGGTCCGCCACAACGGCATCAACGTGAACGGCCGTCGCGTCAATATCCCATCCTATCAGGTGCGCGCAGGAGATGTGGTCGAGGTAATCGACAAGGCGAAAGCCCATCTGCGCATCAAGGCGGCCGCGGAAGCGACGGCCGCACGTGGATACCCGGAGTGGATCGAAGTCGATGCCAAGGCGCTCAAGGGCACCTACAAGGCTGCGCCGCAACGTTCGGAACTGCCGTCGACCATCAATGAGTCGCTGGTCGTCGAGTTGTACTCCAAATAA
PROTEIN sequence
Length: 210
MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLREKQKIRRIYGVLEGQFRLTYKRAEGRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQVVRHNGINVNGRRVNIPSYQVRAGDVVEVIDKAKAHLRIKAAAEATAARGYPEWIEVDAKALKGTYKAAPQRSELPSTINESLVVELYSK*