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scnpilot_expt_750_bf_scaffold_2003_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(7212..7742)

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12495308 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 177.0
  • Bit_score: 334
  • Evalue 6.60e-89
  • rbh
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 316
  • Evalue 2.60e-83
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 176.0
  • Bit_score: 311
  • Evalue 2.20e-82

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCACGTGTAGCCAATAATCCCATTACGTTGCCGAAAGGTGTGGAAGTCACGCTGGAAGGCGGCATTTCCGTCAAGGGGCCGTTGGGCTCCCTGAGACAGGCCGCGTCACCCAATGTGGCCGTTGCGCTCAATGAAGGCGTGATGACGTTCGCCCCCGTGGATGCAAGCATTCAGGCGAACGCCATGGCGGGAACCCTGCGTGCGCTGGTGAGCAATATGGTGCAGGGGGTTTCCAGGGGGTTCGAGAAGAAGCTGACGCTGGTCGGCGTCGGCTATCGCGCTCAAGCCCAGGGCGACGCCCTCAACCTGACACTTGGGTTCTCGCATCCGGTCGTCCATAAAATGCCTGCGGGCATCAAGGTCGAGACCCCGACCCAGACCGAGATTGTGATCAAGGGCATTGATCGCCAGGCGGTTGGCCAGGTGGCCGCCGACGTGCGCGCCTACCGTCCGCCGGAGCCTTACAAAGGCAAGGGCGTGCGCTATAGCGACGAAGTGGTCATCAAGAAAGAGACCAAGAAGAAGTAA
PROTEIN sequence
Length: 177
MSRVANNPITLPKGVEVTLEGGISVKGPLGSLRQAASPNVAVALNEGVMTFAPVDASIQANAMAGTLRALVSNMVQGVSRGFEKKLTLVGVGYRAQAQGDALNLTLGFSHPVVHKMPAGIKVETPTQTEIVIKGIDRQAVGQVAADVRAYRPPEPYKGKGVRYSDEVVIKKETKKK*