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scnpilot_expt_750_bf_scaffold_2003_22

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(10304..10720)

Top 3 Functional Annotations

Value Algorithm Source
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=12495316 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 275
  • Evalue 2.80e-71
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 138.0
  • Bit_score: 271
  • Evalue 7.50e-70
rplP; 50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 138.0
  • Bit_score: 270
  • Evalue 2.00e-70

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCTGCAGCCAGCTAGAAGGAAGTTTCGCAAGGAACAGAAAGGCCGGAATACCGGCATGGCAACGCGTGGCGCCGACGTGAGTTTCGGCGACTTTGGTCTGAAGGCGGTTGGTCGTGGACGTTTGACTGCGCGCCAGATCGAGGCGGCGCGCCGTGCCATGACCCGGCACATCAAGCGCGGCGGACGCATCTGGATCCGCATTTTTCCGGACAAGCCGATTTCCCGCAAGCCGGCCGAAGTGCGGATGGGTAACGGCAAGGGCGCACCGGAATACTACGTGGCCGAAATCCAGCCAGGCAAAGTGCTGTACGAAATGGATGGCGTGAACGAGACGCTGGCACGCGAGGCGTTCCGCCTGGCCGCGGCCAAGCTGCCGATTGCGACCACCTTCGTGAGCCGCCTGATCGGGAGTTGA
PROTEIN sequence
Length: 139
MLQPARRKFRKEQKGRNTGMATRGADVSFGDFGLKAVGRGRLTARQIEAARRAMTRHIKRGGRIWIRIFPDKPISRKPAEVRMGNGKGAPEYYVAEIQPGKVLYEMDGVNETLAREAFRLAAAKLPIATTFVSRLIGS*