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scnpilot_expt_750_bf_scaffold_2003_30

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(14512..14820)

Top 3 Functional Annotations

Value Algorithm Source
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12495324 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 201
  • Evalue 3.00e-49
rpsJ, nusE; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 4.10e-49
rpsJ; 30S ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 102.0
  • Bit_score: 200
  • Evalue 2.40e-49

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCAAAACCAGAAAATCCGCATCCGCCTGAAGGCGTTTGACTACAAGCTGATCGACCAGTCCGCGCTCGAAATCGTCGAGACCGCCAAGCGTACCGGTGCCGTGGTCAAGGGGCCGGTTCCTTTGCCGACTTCGATCGAGCGTTTTGACGTGCTGCGTTCGCCGCACGTCAACAAGACGTCGCGCGACCAGTTCGAGATCCGCACCCATCGCCGTCTGATGGACATCATGGACCCCACCGACAAAACGGTGGATGCCCTGATGAAACTGGACCTGCCTGCCGGCGTCGACGTCGAAATCAAGTTGTAA
PROTEIN sequence
Length: 103
MQNQKIRIRLKAFDYKLIDQSALEIVETAKRTGAVVKGPVPLPTSIERFDVLRSPHVNKTSRDQFEIRTHRRLMDIMDPTDKTVDALMKLDLPAGVDVEIKL*