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scnpilot_expt_750_bf_scaffold_2047_8

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(6605..7249)

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein id=12494729 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 430
  • Evalue 1.10e-117
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD64123.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 213.0
  • Bit_score: 272
  • Evalue 5.20e-70
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 207.0
  • Bit_score: 267
  • Evalue 3.40e-69

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Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
TATACCTATTCCGAAATGGGCCTGATCTACGATCGCCGACGCTTCAAGACCGCCCCGGCTTCGTACGCCGACTTGTGGAATCCCCGCTACGCCGGGCAGATACTGCTGTTCGATGGCGGCACGCATAATTTCTCGCTGGCGGCCATGGCGCTCGGACTCGATCCGTTCCGCATTCCGTCCGCAGAATTCCCGCGCGCACTGAAGAAGCTGCTGGCTTTGCGCCGTAATGCACTGGTGTTCTACAGCCTGCCCGAAGAAGCGGCCCGGTTGTTTCGCGAACAGTCCGCTGCCCTGCTGTTTGCCAACTACGGCAGCCAGCAGGTCAAGTTGCTGCGCGACGCCGGGGTCGACATCGGCTATGCCGTCCCGCGCACCGGCGCACTGGCCTGGCTCGATTGCTGGGCCGTCAGCCGCGGAGCGCGTAACAAGGCACTGGCGGAAGCATGGATCAATTACACGCTGGAGCCCGGCGTCAGCCACGCCTTGAGTGTGCGCCAGGGACTGGCCAACACCCTGGAAACCTCCGCCGCCTCGCGCCCCGGCGATCCCCTCATCTGGCTCGAACCGGTAGAAGACGGCGCCCGGCGTACCCGGTTATGGCAGCGCATCCTGTCCGGCGAGCGCGAAGCCCTCCTGCTGCAATGA
PROTEIN sequence
Length: 215
YTYSEMGLIYDRRRFKTAPASYADLWNPRYAGQILLFDGGTHNFSLAAMALGLDPFRIPSAEFPRALKKLLALRRNALVFYSLPEEAARLFREQSAALLFANYGSQQVKLLRDAGVDIGYAVPRTGALAWLDCWAVSRGARNKALAEAWINYTLEPGVSHALSVRQGLANTLETSAASRPGDPLIWLEPVEDGARRTRLWQRILSGEREALLLQ*