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scnpilot_expt_750_bf_scaffold_3800_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 2..1381

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=12494641 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 460.0
  • Bit_score: 900
  • Evalue 7.80e-259
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 459.0
  • Bit_score: 856
  • Evalue 3.60e-246
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO: similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 459.0
  • Bit_score: 856
  • Evalue 1.80e-245

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
GGCGATGCCGAGGCGATCCGAACCATTGCCGAAACGATCCAGAATTCGACCGTGTGTTCGCTGGCGCGCGCCAACGAACGCGATATCCACGCGGCGGGTGGCGCGATCAAGCCGGCCAGGTCGGGGCGCATCCATACCTTCATTGCCACCAGCCCCCTCCACATGGAGAAGAAGCTGCGCATGCAGCCGGAGCAGGTGGTCGAGGCCGCCGTCAAGGCGGTCAGGCTCGCGCTCGAATACACCGACGACGTCGAGTTCTCGGCCGAGGACGCGGTGCGCTCGGACATGGACTTTCTTGTACGGATTTTCGACGAGGTGATCAAGGCCGGCGCCAAAACCATCAACGTCCCCGACACGGTCGGCTATTCGATTCCGGCCTTGTGGGGCGAGCGCATGAAGCAGCTGATCGAGCGCGTGCCGGGCGCCGACACGGTGATCTGGTCGACCCACTGCCACAACGACCTCGGCATGGCGGTCGCCAATTCGCTCGCCGCGGTGATGAACGGCGCGCGTCAGGTCGAGTGCACCATCAATGGTCTCGGCGAGCGCGCGGGCAATGCCTCGCTGGAGGAAATCGTGATGGCGGTGCGCACCCGCCGCGACGTGTTCAACTGCGACACGCGCATCGACGCCACCCAGATCGTGCCGGCGTCCAAGCTTGTTTCCACCATCACCGGCTATCCGGTGCAGCCGAACAAGGCCATCGTCGGCGCCAACGCCTTTGCCCACGAATCCGGCATTCATCAGGACGGGGTGCTGAAACATCGCGAGACCTATGAAATCATGCGGGCCGAGGATGTGGGCTGGAATGCCAACCGTCTGACGCTCGGCAAGCTTTCCGGGCGCAATGCCTTCAAGACCAAGCTTGCCGAGCTTGGCATCGTGCTCGACAGCGAGGAAGCGCTCAATACAGCGTTCGCCCGCTTCAAGGATCTCGCCGACAAGAAGCGCGAAATCTTCGACGATGACCTGCAGGCGCTGGTGTCCGACGAAGGCTATGCCGCCGAGCACGAACGCTTCAAGCTGGTATCGATGAAGGTGTGTTCGGAGACCGGCGAGATTCCGCGCGCGCAACTCGTATTCACTGACGATGGCGCCGAATGGCAGGCCGATGGCCAGGGTTCAGGCCCGGTCGACGCGACCTTCAGAGCGCTGGAGTCGGTGGTTCACAGCGGCGCGGACCTGTTGCTCTATTCGGTCAGCAACATCACCAGCGGCACCGATGCGCAGGGCGAGGTGACCGTGCGGCTGGCGCAGGATGGGCGCGTGGTGAACGGACAGGGAGCCGACACCGACATCGTGGTGGCCTCGGCCAAGGCCTATCTGCACGCGCTCAACAAGCTCAACAGCAAGCGCGAGCGCGCGCATCCGCAGGTGTGA
PROTEIN sequence
Length: 460
GDAEAIRTIAETIQNSTVCSLARANERDIHAAGGAIKPARSGRIHTFIATSPLHMEKKLRMQPEQVVEAAVKAVRLALEYTDDVEFSAEDAVRSDMDFLVRIFDEVIKAGAKTINVPDTVGYSIPALWGERMKQLIERVPGADTVIWSTHCHNDLGMAVANSLAAVMNGARQVECTINGLGERAGNASLEEIVMAVRTRRDVFNCDTRIDATQIVPASKLVSTITGYPVQPNKAIVGANAFAHESGIHQDGVLKHRETYEIMRAEDVGWNANRLTLGKLSGRNAFKTKLAELGIVLDSEEALNTAFARFKDLADKKREIFDDDLQALVSDEGYAAEHERFKLVSMKVCSETGEIPRAQLVFTDDGAEWQADGQGSGPVDATFRALESVVHSGADLLLYSVSNITSGTDAQGEVTVRLAQDGRVVNGQGADTDIVVASAKAYLHALNKLNSKRERAHPQV*