ggKbase home page

scnpilot_expt_750_bf_scaffold_2788_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(16481..16792)

Top 3 Functional Annotations

Value Algorithm Source
cyclic-AMP phosphodiesterase id=12493389 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 208
  • Evalue 3.20e-51
cyclic-AMP phosphodiesterase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 103.0
  • Bit_score: 176
  • Evalue 2.40e-41
cyclic-AMP phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 103.0
  • Bit_score: 169
  • Evalue 4.60e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
GGCAGCCTTGTGTTCAGCGGCGACACCACCCACAGCGATGCCTTCGTCGCGGCGCTCAACGCGATTCCCGACCTGCGCCACCTCATCATCGAAACCTCGTTCGAGAATGCGCTGGTCGGGATCGCCAGGGCCTCGAAGCATCACTGGCCGGATTCGCTGGCGGCGGAACTGCGCATGCTTCGTGTGCGTCCCGAGATCTGGATCACGCATCTGAAACCCGGCAACGAAGCGGCGATCATGAACGAACTGCGAGTCGCCGCGCCCGACTGGGGGATTGAGGCGCTGCGGCAAGGGCAGGTAATTGTCTTATAG
PROTEIN sequence
Length: 104
GSLVFSGDTTHSDAFVAALNAIPDLRHLIIETSFENALVGIARASKHHWPDSLAAELRMLRVRPEIWITHLKPGNEAAIMNELRVAAPDWGIEALRQGQVIVL*