ggKbase home page

scnpilot_expt_750_bf_scaffold_13485_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(1..1968)

Top 3 Functional Annotations

Value Algorithm Source
conjugative coupling factor TraD, TOL family id=12497086 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 656.0
  • Bit_score: 1238
  • Evalue 0.0
conjugative coupling factor TraD, TOL family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 605.0
  • Bit_score: 1108
  • Evalue 0.0
conjugative coupling factor TraD, TOL family similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 654.0
  • Bit_score: 782
  • Evalue 1.20e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1968
CACGAGTGGTTCTTTCTCCCCAAGGAAGTCGTGGGCATCGCGGCGCTCGGCCTTGTCGGGCACGCCGCATGGCGTGCCCGACAAGGTTTCAGGGTTTCCCGATTTCAGCGGAACCTGATCCGCTTGCCCAGGTACGTCATCCAGACAGCCGACATTCCGGTCTCGAAGAGCCGGCTCTTTCTGGGCATGGGATTCAAGTGGGACCAGCGCCACACCCAACGGCTGGCTCTCGCCCGAGATCCCAAGAACCGGAAGTACATCACCCAATCCCCTGCCTACGCATGGGCAAGGCAATTCGAGTTCAGAAACGAGGGGAGGGGAGGGCTACACGGATGGGTTGCCAGACAAACCCGGCGGGACGCATGGTGGAACCCCGTCGCCCCTCTTCCACCCGTTGGTGGCGATCCGGTGATACACGGCCTGGAACCGGAGGAATCCGAAGTCAGCATGGACCTGGTCGAGCGGCCGGGCCACATGCTCGTGCTCGGGACAACGCGCGTCGGCAAGTCCCGGCTCGCCGAAGTGCTCATTACCCAGGACATCCGGCGCGGCGATGTGGTCATCGTCTTCGATCCCAAGGGTGATGCGGGCCTTATGACGAGGTGTTACATCGAAGCGGCCATGGCGGGCAGGGAGTTCTTCATGTTCCACCTGGGCTATCCCGATCAGTCGGCCCGGTACAACCCCATCGGCAACTTCGCTCGCACGACCGAGGTCAGCACGCGGATTGCCGGGCAGTTGCCTGGCGAAGGGCAATCGGCCGCGTTCAAGGAGTTCGTGTGGCGCTTCGTCAACGTGATCGCCCGGGCGCGGACCACGCTGGGCTACCGCCCGGATTACCGGATGATTTATGAGGATGCGGTCAACATCGACGCCCTTGCGCTCGAATACTTCAAGTTCTGGCTTGACCGGGAGCGGCCGGGCTGGGACCAGGAGGTCCAGGCTATCGAGCTCGACAAGGCCCAGATCCAGCAAGTCATGAAGTCCGGCCGCACGATGGATGCGATGAAAACCATGCTGTTTGTTCGGGAGAACAACCTGCATGACCCGATCGCGGATGGTCTGGCCTCTATTCTGTCGAACGACCGGAGCTACTTCGAAAAGCTCGTTTCGAGCCTTTACCCCCTGCTGGAGAAGCTCACGACCGGCAAGACCGCCGGGATTCTCTCGCCCCAGTACGACGATCCGGACGACCCCAGGCCGATTTTTGACTGGATGAGCGCGATCGAGCGTGGGGCAGTTGTGTATGTCGGACTGGACTCCCTGTCGGACTACGAGGTGGCCGGAACGGTCGGAAACGCCATGTTTGCGGACCTGACCTCGATTGCCGGCCAAATCTACAAGTTCGATCAGGGATACGGGCTGTCTACGGCACCACCCAAACGGAAGCTCTCGATCCATGCTGACGAGTTCAACGAACTGATCGGGGACGAATTCATCCCGCTTCTGAACAAGGCGGGCGGCGCGGGGTTTCAGGTGACGGTCTACACCCAGACCTGGGCCGACGTGGAAGCCCGCATTGGCGACAAGGCCAAGGCCTCCCAGATCGGCGGCAACCTGAACACCCTGGTCATGCTGCGCGTGAAAAACAAGGAGACGGCAGAAATCCTGACCAACCAGCTGCCCGACGTGCAGCTGGTGACGTCGATCCAGGCCAGCGCTGTCACGGATAGCTCCGATGACCGCGAGGTTCTGTCCTTTACGACCCGCAACGAGGACAGGATCAGTACCCAGGAGGCCCCCATGCTGGCCCCTGCGGATCTGGTCCAGCTTCCCAAGGGCCAGGCTTTCGCGCTGATCGAAGGCGGCCAGCTCTACAAGATACGGCTGCCGCTGTTCGACCCGGACGAGGCCTTGCCCATCCCCGCTTCGCTGGAGGATATCGCGGCCAGCATGCGGCAGAAGTACGACGGCCAGACCGGACAGATCGATTCTATGGTTGTGGAGGGCAAAGGCAGTGGCTTCTAG
PROTEIN sequence
Length: 656
HEWFFLPKEVVGIAALGLVGHAAWRARQGFRVSRFQRNLIRLPRYVIQTADIPVSKSRLFLGMGFKWDQRHTQRLALARDPKNRKYITQSPAYAWARQFEFRNEGRGGLHGWVARQTRRDAWWNPVAPLPPVGGDPVIHGLEPEESEVSMDLVERPGHMLVLGTTRVGKSRLAEVLITQDIRRGDVVIVFDPKGDAGLMTRCYIEAAMAGREFFMFHLGYPDQSARYNPIGNFARTTEVSTRIAGQLPGEGQSAAFKEFVWRFVNVIARARTTLGYRPDYRMIYEDAVNIDALALEYFKFWLDRERPGWDQEVQAIELDKAQIQQVMKSGRTMDAMKTMLFVRENNLHDPIADGLASILSNDRSYFEKLVSSLYPLLEKLTTGKTAGILSPQYDDPDDPRPIFDWMSAIERGAVVYVGLDSLSDYEVAGTVGNAMFADLTSIAGQIYKFDQGYGLSTAPPKRKLSIHADEFNELIGDEFIPLLNKAGGAGFQVTVYTQTWADVEARIGDKAKASQIGGNLNTLVMLRVKNKETAEILTNQLPDVQLVTSIQASAVTDSSDDREVLSFTTRNEDRISTQEAPMLAPADLVQLPKGQAFALIEGGQLYKIRLPLFDPDEALPIPASLEDIAASMRQKYDGQTGQIDSMVVEGKGSGF*