ggKbase home page

scnpilot_expt_750_bf_scaffold_26207_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 2..1234

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12493603 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 411.0
  • Bit_score: 781
  • Evalue 4.70e-223
RND efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 411.0
  • Bit_score: 697
  • Evalue 1.30e-197
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 411.0
  • Bit_score: 665
  • Evalue 1.10e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
CCGGAAGGCATTCCGTTCGACGAGCTGAGCCAGCGCCAGCAGGCGCTGGCCGCCCTCGTGCAGAAGCACCCGGCGGTCGAAGGCCTGATGTCGAGCGCGGGGCAGGGCGGCGGTGGCGTGACCGGCGGCAACATCGGGCGCCTGGTGATCCGTCTGGCGCCGCGCAACACGCGCAAAAGCGCCGACGGGGTGATCGACGAGCTGCGTGCGGTTACGCGCAAGATCAGCGGCATCAACGTCACGTTCCAGAATCCCGCATCGATCAACGTCGGCGCCTTGTCCTCCAGCAGCGATTACCAGCTGACACTCATCTCGGGGGATTTCGAGGCATTGAAAGCGACGTCGGCCGAAGTCGAGAAGCGGCTGGAAGCGCTGCCGCAGATCGAGGACGTCGACAGCAATCTCGAACTGCGCAATCCCGAGCTGCGCGTCACCCTCGATCCGCTGGAAGCCGCCCGGCTCGGCATCACGGCCCAGCAGGTCCAGCAAACGCTGTACGACGCGCTGGGCGGACGCCGTATCAGCGAAATCTACGGCACCAGCGACCAGTATGTGGTGAGTGTCAAGGCGCTGCCCGAGGCCCAGCTGGACCCGGCAGTCATCGGCCAGTTGCCCCTGAAAACGTCAACGGGCGGAATCACGCGGCTGGACGCCGTGGCGCGGGTCGAACCGGGCGTGGGTCCGATCGCGGTCTATCATTACGGCCAGCAGCCGGCGGTCACGCTGTCCTTCAATCTCGCGCCAGGCGCCTCGCTCGATGCCGCGCTGGCCGCGGCCTACGATGCCGCCAGCGAAGTCGTGCCGCCCGAGGTGGCGCTGGAATTCACCGGTGCGGCGCAGAAGTTCCAGGAATCGACAGTTCAATTGCCCTTACTGCTGCTGTTCACCGTCGTCATCATCTACATGGTGCTGGCGGTGCTGTACGAGCATCTCGGCCATCCGCTGACCATCCTCACCGCGCTGCCGCTGGCGGGATTCGGGGCCTTGCTGGTGCTGCTGCTGGCCAACGACGAACTCAACATCTTCAGCTTCGTCGGCATCATCCTGCTGGTGGGTCTGGTGAAGAAGAACGGCATCATGATGATCGATTTCGCCCTGGCCCGGCAGCGCGCGGGAATGAGCGCCGAGGACGCCATCGTCGAGGCCTGCCTGGTGCGTCTGCGGCCGATCATGATGACCACCTTCGCCGCCATCTTCGCCACCCTGCCGATTGCCGTCGGCTTCGGCGCCGGC
PROTEIN sequence
Length: 411
PEGIPFDELSQRQQALAALVQKHPAVEGLMSSAGQGGGGVTGGNIGRLVIRLAPRNTRKSADGVIDELRAVTRKISGINVTFQNPASINVGALSSSSDYQLTLISGDFEALKATSAEVEKRLEALPQIEDVDSNLELRNPELRVTLDPLEAARLGITAQQVQQTLYDALGGRRISEIYGTSDQYVVSVKALPEAQLDPAVIGQLPLKTSTGGITRLDAVARVEPGVGPIAVYHYGQQPAVTLSFNLAPGASLDAALAAAYDAASEVVPPEVALEFTGAAQKFQESTVQLPLLLLFTVVIIYMVLAVLYEHLGHPLTILTALPLAGFGALLVLLLANDELNIFSFVGIILLVGLVKKNGIMMIDFALARQRAGMSAEDAIVEACLVRLRPIMMTTFAAIFATLPIAVGFGAG