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scnpilot_expt_750_bf_scaffold_382_15

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(31255..31908)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QX39_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 212.0
  • Bit_score: 243
  • Evalue 2.50e-61
TetR family transcriptional regulator {ECO:0000313|EMBL:ETF03928.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 212.0
  • Bit_score: 243
  • Evalue 3.40e-61
tetR; tetracycline repressor protein class C similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 212.0
  • Bit_score: 238
  • Evalue 1.30e-60

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Taxonomy

Advenella kashmirensis → Advenella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGACTCCAGCGCGACCAGATCATCGCGACAGCCCTCGTGCTGCTCGACGAGAACGGCCTCGACGGCCTCACGATGCGGGCGCTGGCCCAGGCGCTGCAGGTGCAGGCCCCTTCCCTCTACTGGCATTTCCCGAACAAGAAGGCGCTGATCGACGGCATGGCCGATGCGCTGGTCGAAAGCGTGGCGCGCAACCCCACCGAAGGCATGCCCTGGCAGGAGTGCGTGCGCACCGTGGGACAGGAACTGCGCCGGGGCCTGCTCTCGCACCGTGACGGCGCGCGGGTCTACGGCGGCACCTACGTCACCTCCGACAACACGCTGCGCGTGGGCGAGGCGATGGTCGGCCCGCTGCTGCGCGCGGGGGCGAGCCCCAAGCTGGCGGCCTGGGGTTCATTCAGCATGATGTATTACGTGCTGGGCTTCGTGATGGAAGAGCAGGCACTGGGCCCAGGCACCGGCATCGACGCGGTGGAGAACCAGGACGAACTGCTGGAGAAGACGAAGCAGCAGTTTCCTTCGGTCTTCGCCTGCGCCGAGGCGCTCTTCAACACCGACTTCGAAGAGCGTTTCGCGCTCGGCCTCGACGTGATCGTGGCCGGCCTGGCGAAGAAGATCGAGGCGGAGCCCGCGACGGCGAAGCCGAAGAAATGA
PROTEIN sequence
Length: 218
MRLQRDQIIATALVLLDENGLDGLTMRALAQALQVQAPSLYWHFPNKKALIDGMADALVESVARNPTEGMPWQECVRTVGQELRRGLLSHRDGARVYGGTYVTSDNTLRVGEAMVGPLLRAGASPKLAAWGSFSMMYYVLGFVMEEQALGPGTGIDAVENQDELLEKTKQQFPSVFACAEALFNTDFEERFALGLDVIVAGLAKKIEAEPATAKPKK*