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scnpilot_expt_750_bf_scaffold_2110_3

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1435..2019

Top 3 Functional Annotations

Value Algorithm Source
Putative glycoside hydrolase, family 19 n=1 Tax=Variovorax paradoxus B4 RepID=T1XG38_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 194.0
  • Bit_score: 329
  • Evalue 1.80e-87
  • rbh
putative glycoside hydrolase, family 19 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 194.0
  • Bit_score: 329
  • Evalue 5.00e-88
  • rbh
Putative glycoside hydrolase, family 19 {ECO:0000313|EMBL:AGU51518.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 194.0
  • Bit_score: 329
  • Evalue 2.50e-87

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGATCGACACCCAGACCCTCATCGACTGCATTGGCGCCACGCGCGCCAACGCCGAGCGCTACACCCTGTACCTGGCCGATGGGATGAACCGCTTCGGCATCCACACGCCGAACGCGATGGCGGGCTTCCTCGGCCAGCTCGTCATCGAATCCGAGGCGCTGGCCAAGGTCGAAGAAAACCTCAACTACACAACGGCCGACCGGCTGCGCGAGATTTTTCCGAGCCTGTTCGTGCAGGGCGGCTATCGCGCCGAGGACTACACGCGCAACCCGAAGGGCTTGAGCCAGCTTCGCTACAAGGGCTTCCACGGGCGCGGCTTGATCCAGCTCACGTGGGAAGACGCCTATGTCGCGGCTGGCAAGGCGCTTGGTGTGGGTTTGCGTGCGAACCCTGCGCTGCTGCTCGAGCCGCAGCATGCGGCGATGTCGGCGTGTTGGTTCTTCGCGATCTACAAGGACTGTTTGCCGGCAGCCGAGCGGGGTGATGTCTACGATCTGACAGGGCGCGTCAACGGGCCGAAGCGGTTGAAGCTGGCCGAGCGCAAGGCGGCTACTGCGCGCGCCTGCAAGGTGCTGAGCAAATGA
PROTEIN sequence
Length: 195
MIDTQTLIDCIGATRANAERYTLYLADGMNRFGIHTPNAMAGFLGQLVIESEALAKVEENLNYTTADRLREIFPSLFVQGGYRAEDYTRNPKGLSQLRYKGFHGRGLIQLTWEDAYVAAGKALGVGLRANPALLLEPQHAAMSACWFFAIYKDCLPAAERGDVYDLTGRVNGPKRLKLAERKAATARACKVLSK*