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ar4r2_scaffold_3042_3

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2591..3148)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein DNA-binding protein id=2314580 bin=GWA2_OP3_52_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 187.0
  • Bit_score: 213
  • Evalue 2.30e-52
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EGV50012.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 211
  • Evalue 1.20e-51
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 187.0
  • Bit_score: 208
  • Evalue 1.20e-51

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Taxonomy

endosymbiont of Riftia pachyptila → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAGAGTTCCACTGCAAATTACCTTCAGGGATATTCCGCCGTCTGAAGCCATTGAAACGGCGATCCGTGACAAGGCTATGAAACTGGAGCGTTACTTTGACCGCATCACGTCGATGCGGGTGACGATTTCTGCGCCGCACAAGAGTCATCAAAAGGGCAATCTTTATGACGTGAATATTGATATTACGGTGCCAGGCCAAGAGATTGTGGTGAGTCATGATAAGCATGACCAGCACTCGCATGAGGATTTTTATGTCACGCTGCGCGATGCCTTTGCTGCGGCACAGCGTCAGTTAGAGGGTTATGTCGGCAAAATGCGCGGCGAGGTGAAGGCGCACGAGGTGCCAGCGCATGGTCGGGTGATTGAAGTGACCCCGGATTCCGGCACGATTTTGACCTCGGATGGACGCGAAATTTATTTCCACCGCAACAGCTTGTTGAACGTCGAGTTTGACGACTTGCCGCAGGGTGCGGAAGTGCGTTTTGACGAAGTCGAGGGTGACAAGGGTCCCAAGGCCAGTTCGGTGCAGCTGATGGGTAAACACCATATTGTTTGA
PROTEIN sequence
Length: 186
MRVPLQITFRDIPPSEAIETAIRDKAMKLERYFDRITSMRVTISAPHKSHQKGNLYDVNIDITVPGQEIVVSHDKHDQHSHEDFYVTLRDAFAAAQRQLEGYVGKMRGEVKAHEVPAHGRVIEVTPDSGTILTSDGREIYFHRNSLLNVEFDDLPQGAEVRFDEVEGDKGPKASSVQLMGKHHIV*