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cg1_0.2_scaffold_706_c_13

Organism: CG1_02_FULL_Alphaproteobacteria_46_17_curated

near complete RP 53 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38 MC: 1
Location: 13843..14445

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRP1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 188.0
  • Bit_score: 118
  • Evalue 6.40e-24
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Alphaprot_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 393
  • Evalue 1.90e-106
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 188.0
  • Bit_score: 118
  • Evalue 1.80e-24

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Taxonomy

CG_Alphaprot_01 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGTCATACAGACTACATCAGCAAAAACCAGAGGGTTTTCTCGGTATGAGGACGCGACAGACGATCAGCTCGTCAGTCTGATCCAACTGGGTGATGATCGGGCTTTGGATTGCATCATGCGCCGCTATCGTGGCCTTGTTTATCGTGTGACCAAGACATATCTGGGCAGTATGCAAGACGCAGAAGATATCTTTCAGGAAATCAGCCTGTCTTTGCACCAGAATCGCAATTCTTACAAATCTGGCCCGGCAAAATTTTCCTCTTGGCTGTATCGTGTGACCATCAATCGTTGTCTGGATATTCTGAAAACAACGAAATCTGGAAAGCAACATACAGAGCTGCATGATGCCATTCCTGACTTGGCGATTAGCGCAGAAGTTATCCTACAACAAAGTGAATTGCTTAAAGAGCTGGATGAATTGCTTGACTTACTGCCAGGCCAGCAAAAATCTGCCATCTCTCTTTATTATTGTGAAGAAATGGATATTCCGGATATTGCGGAATATATGAAAATTTCAGAATTGGCAGTCCGGTCGTTAATCAAGCGCGGCAAAGAAAAGATGCGCGGCTCTTCAGGCAAGATTGCGACTTATTTTTCTTGA
PROTEIN sequence
Length: 201
MVIQTTSAKTRGFSRYEDATDDQLVSLIQLGDDRALDCIMRRYRGLVYRVTKTYLGSMQDAEDIFQEISLSLHQNRNSYKSGPAKFSSWLYRVTINRCLDILKTTKSGKQHTELHDAIPDLAISAEVILQQSELLKELDELLDLLPGQQKSAISLYYCEEMDIPDIAEYMKISELAVRSLIKRGKEKMRGSSGKIATYFS*