ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cg1_0.2_scaffold_5388_c_2

Organism: CG1_02_FULL_Micrarchaeota_49_24_curated

near complete RP 26 / 55 MC: 4 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: 603..2243

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase vi, b subunit (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Micra_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 546.0
  • Bit_score: 1085
  • Evalue 0.0
DNA topoisomerase VI subunit B (EC:5.99.1.3) similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 541.0
  • Bit_score: 475
  • Evalue 2.10e-131
DNA topoisomerase VI, subunit B n=2 Tax=mine drainage metagenome RepID=T1A8R2_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 558.0
  • Bit_score: 503
  • Evalue 1.90e-139
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_01 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 1641
ATGCCAATCGATTCATTCAGCCAGTTTAAGGAGCACTCCGTAGCCGAGTTCTTCAAGAAGAACAAGCAGATGCTCGGCTTTTCAGGGAAGGTCCGCAGCCTGACCACCATCGTGCACGAATTTACTTCCAATTCATTGGACGCCGGCGAGGAGGTCGGCATCCTCCCGGAAATTTTCATTCAATTGGAAGAGGAGGGTGACGACAAATACAAAATCGCGGTTCAGGACAACTGCGGCGGCATCCCTGAGAAATACCTGGGCAAAGCCCTCGGCCAGCTCCTTGCAGGCACAAAATTCCACAGGTATGTGCAGCAGCGTGGCCAGCAGGGCATAGGCGCATCTGGGTGCATAATGTATTCGCAAATCACCACCGGCAAACCCGCATGGGTGCGCTCAGGCTACAAAAATGTAATTATTGAATGCAACATCGGCATAAACGTTTCCAAGAACACCCCGGTCATCACCAACCTCACAAAGACAATGGGCGAATTTTCAGGGCTGCGCATCGAGGCCCATCTGGGCGATGTAAGATATGAAAACAGCGGCTATGGAGTCTATGAATATCTGAAGCAGACCGTGCTTGCCAATCCCCATGCGCAGATTGAATTCATCGCACCGGACGCTCAGAGGTATATGTTCCCGCGCGCGGTTGATGTGGTGCCCAAGCCGCCTATTGAAACCAAGCCGCATATCCTTGGGATAACCGCAAATGATTTGGTGGAGTTCAGCAGGCGCATAAAGGAATCGCGCATATCGGCATTTTTGGCTGAAGAATTTTCAAGGGTGTCATCAAACAAGGTGAAAGAGCTTCAGGAGCTTCTTCCGGATATTGATTTCTCCCAGCCGCCCACCTCGCTCAATTGGGATACGGCTGAAAAGCTAATCAAGGCAGTGCACACACTGAAGTGGATTGCGCCAGCCACTGATATCCTCCGCCCCATTGGCAAGGAAAATGTCGCAAGAGCATTGCAGAACATATTAAACCCGCAATTCATTGCCCAATCAGACCGTTCCCCCCAAATCTTCCACGGCGGCATCCCCTATCAGGTTGAGGTTGCCATCGCCTATGGGTTCACAAATGGCGCCCACAACCGGATTATGCGGTTTGCCAACCGGGTGCCCCTGCTGTTCGACGCAGGCGCCTGCGGCCTTACCGAGGCAGTCAAGACCATTGAATGGAAGCGCTACAGGATAGATGATTTTGAAAACATGCCAATTGCGGTTTTTGTGAATTTCGTGAGCGTGCACGTGCCCTATACCAGCGCGGGCAAGCAGGCCATTGCCCTGGAAGAAGAAATTATTGCAGAAGTGCGCAATGCCATCATGGAAGCCGCCAGGCCTGTGAAGGGCTACCTCAATGGGATTGTTCACCTGCAGGAACGGAGCTCAAGGCGAAAGGTTTTCCTGCGCTATGTGGCGCAGCTCGCCGGGGACATGTCAGAATTGGCAGACATGCCCAAGAAAAAAGAAGCGATAAAGAAAGGGCTGGTTGACCTGGTGGAGCACCGCGTGGGGCTGATTGAGGAGGCTGAGGATGCCGAGGCAGAAACCGCCAAGGAGGCAAACGCTGCTAACGGTGCGGTTGCAAATGGCCAGGAAAATGGCAATGGGAAAAAGGATTTTGAGGAGAAAGGTGAATAG
PROTEIN sequence
Length: 547
MPIDSFSQFKEHSVAEFFKKNKQMLGFSGKVRSLTTIVHEFTSNSLDAGEEVGILPEIFIQLEEEGDDKYKIAVQDNCGGIPEKYLGKALGQLLAGTKFHRYVQQRGQQGIGASGCIMYSQITTGKPAWVRSGYKNVIIECNIGINVSKNTPVITNLTKTMGEFSGLRIEAHLGDVRYENSGYGVYEYLKQTVLANPHAQIEFIAPDAQRYMFPRAVDVVPKPPIETKPHILGITANDLVEFSRRIKESRISAFLAEEFSRVSSNKVKELQELLPDIDFSQPPTSLNWDTAEKLIKAVHTLKWIAPATDILRPIGKENVARALQNILNPQFIAQSDRSPQIFHGGIPYQVEVAIAYGFTNGAHNRIMRFANRVPLLFDAGACGLTEAVKTIEWKRYRIDDFENMPIAVFVNFVSVHVPYTSAGKQAIALEEEIIAEVRNAIMEAARPVKGYLNGIVHLQERSSRRKVFLRYVAQLAGDMSELADMPKKKEAIKKGLVDLVEHRVGLIEEAEDAEAETAKEANAANGAVANGQENGNGKKDFEEKGE*