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cg1_0.2_scaffold_15509_c_2

Organism: CG1_02_FULL_Comamonadaceae_60_18_curated

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 1643..2407

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 254.0
  • Bit_score: 507
  • Evalue 8.70e-141
RNA-binding S4 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ST9_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 253.0
  • Bit_score: 319
  • Evalue 2.40e-84
  • rbh
RNA-binding S4 similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 253.0
  • Bit_score: 319
  • Evalue 6.80e-85

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Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGAAGACGCCTCTGCCCGAGGCGGGGGAGCGCCTGGCCAAGCGCGTGGCGCAGTTGAGCGGTCGCTCGCGCCGCGAGGCCGAACAACTCATCGAAGGCGGTTGGGTGCAGGTCAACGGCGTGGTGGTTGAAGAGCCCATGGCGCGTGTGACCGACCAAACCGTGGTGATTGACCCAGCTGCCAGCCCGATGGCGCTGACTGACGTGACGCTGCTGCTGCACAAGCCGCCGGGGCTGGACGCCATGGCCGCGCTGGGTGGCGCCAACCGGCACGTCAAGCCCGCGCAGCAGTTGCTGCAGGCGGCAACGCACTGGGCACAAGACCCAGCCGGCCAGCGCGCGCTCAAACGTCACCTGAGCAAGCTCACCCCGGCTATGCCGCTGGAAACTGCCGCCAGCGGGCTGGTGGTGTTCACGCAAGACTGGCGCGTGCTGCGCAAGCTCACCGATGATGCGGCATTCATTGAGCATGAATTTCTGGTGGAGGTGCAAGGCGAGATCAGCGCCGAGCCATTGCACCATCTCAACGCCCTGGGGGTGATGGAAAAACTGCCGCCGTTCAAGGCCAGCGTGAACAGCACGCATGAGGGCCTCACGCGGCTGCGCTTTGCCGTCAAGGGCGCGCACCCAGGGTTGATCGCCTACCTGTGCGAGCGCGCAGGGCTGCACATGGTGTCGATGAAGCGCCTGCGCATCGGGCGCGTTACGCTGGCCCATTTGCCCGAGGGGCTGTGGCGCTATCTGGGGGATGGGGAGCGGTTTTAG
PROTEIN sequence
Length: 255
MKTPLPEAGERLAKRVAQLSGRSRREAEQLIEGGWVQVNGVVVEEPMARVTDQTVVIDPAASPMALTDVTLLLHKPPGLDAMAALGGANRHVKPAQQLLQAATHWAQDPAGQRALKRHLSKLTPAMPLETAASGLVVFTQDWRVLRKLTDDAAFIEHEFLVEVQGEISAEPLHHLNALGVMEKLPPFKASVNSTHEGLTRLRFAVKGAHPGLIAYLCERAGLHMVSMKRLRIGRVTLAHLPEGLWRYLGDGERF*