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cg1_0.2_scaffold_171_c_19

Organism: CG1_02_FULL_Comamonadaceae_60_18_curated

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(15790..16422)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2I9_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 204.0
  • Bit_score: 309
  • Evalue 2.10e-81
  • rbh
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Rhodof_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 410
  • Evalue 2.10e-111
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 207.0
  • Bit_score: 302
  • Evalue 7.10e-80

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Taxonomy

CG_Rhodof_04 → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAGCAGCCTGGATGAACCCGCTGCGACGCCGCCAGACAGCGACACCTTGCTGGTGCAGCGCACCGTGGCTGGTGACCAGCGCGCGTTTGAATTGCTGGTCATCAAATACCAGCGACGGGTGGAGCGCCTGATTTCGCGCATGGTGCGCGACGTGGACCTGGTGCCCGATATTGCCCAGGAAACCTTTATTCGGGCCTACCGCGCCTTGCATCAGTTTCGCGGCGACGCGCAGTTTTACACCTGGCTGTACCGGATCGCGGTGAACACGGCCAAAAAGTTTTTGCTGGAGCTCAAGCATGATCCGACGATCTCGGACAACGCATTGGCGTCTCGCGACGAAGACGATGAAACTTTTATCTCCAGAAACGAACCAAGTACCGAAGAGTCGCCCGAATCGCTGTTGGCAGCCAAAGAAATCTCCGAGGTCATCAATGCGGTTTTGGCCGAGTTGCCGGATGATTTGCGTCAAGCCATCACATTGCGTGAAATGGAAGGTCTCAGTTATGAAGATATTGCCGCCATCATGGGGTGTCCTATCGGCACCGTGCGGTCGCGGATATTCCGGGCCCGAGAGGCGGTTTCTGCCAAGGTGCGGCCCTTGCTGGAGCGCCAGGGTGGCAAGCGCTGGTAA
PROTEIN sequence
Length: 211
MSSLDEPAATPPDSDTLLVQRTVAGDQRAFELLVIKYQRRVERLISRMVRDVDLVPDIAQETFIRAYRALHQFRGDAQFYTWLYRIAVNTAKKFLLELKHDPTISDNALASRDEDDETFISRNEPSTEESPESLLAAKEISEVINAVLAELPDDLRQAITLREMEGLSYEDIAAIMGCPIGTVRSRIFRAREAVSAKVRPLLERQGGKRW*