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cg1_0.2_scaffold_11110_c_6

Organism: CG1_02_FULL_Berkelbacteria_42_45_curated

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(3205..4419)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=CG_Berkel_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 404.0
  • Bit_score: 773
  • Evalue 1.40e-220
type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=15190111 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 383.0
  • Bit_score: 283
  • Evalue 4.00e-73
  • rbh
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 370.0
  • Bit_score: 217
  • Evalue 5.80e-54

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Taxonomy

CG_Berkel_01 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGAGAAAGATAAACTTCAAATCGAAACAGAAAAAAAGCTGCCGGAGGAAGTTGATAAATCCGCCGCTATTGCTGAAAATCCACCACCTAAAAATCAACCAGAAGAATCCAAAGAATCCGAAAAAGAACCAAAGGAAAAAGCCAAGAGGGGCAAGAATTTTTTGCTTTTTGGCATCTCTTTAAATGAAAAGGTCTTTCTGGCCAAACATCTGTCAACGATTTTAAAAGCCGGTATGGATTTGCCGGAGAGTTTGCGGATTGTCCAAAGGCAATTGCATGGCGGGCTGAAAAATGTTCTCGGCGATGTCTCGGCAAAAGTTGAGGGTGGAAAATCCCTGAATGTCGCTCTCTCCGAATATCCAAATGTTTTCGATCCTCTATTTATCAATATGGTCAAGGTCGGCGAAAAAAGCGGCACTCTTGATCAAAGTTTACATTATCTCTCGATTCAATTAAGCAAAGACGCCAAATTAATCTCAAAAGTCAAAAGCGCCGCACTTTATCCGCTGATTGTTCTCTCTGCTGCCGTTGTCGTCGGCGGCGGCGTATCTTATTTTGTCCTGCCGAAACTGACAAAATTATTCACCTCTTTTAAAGCCGATCTGCCGCTGGCAACAAAAATACTGCTGGCAATCTCCAATAATCTTCAACACTATGGCCTTTGGTGGTTGGCCGGGATTATTTTGGCGATAATTCTTTTCTCCGTTCTGCTGCGAGTCCGTTTTTTCCGGGCGATTTGGAACAATGTCACCCTTCACACGCCGGTCGCCGGCAAAATAATTATCAGCTTAAATCTGGCTCGATTCAGTTTAACCTTGGGCACACTGCTAAAAAGCGGCGTGGCGATTGATGACGCGCTGGGAATTACCAAAGAGGCGATAACTTCAATCCCCTACCAAAAAACGATCAAAATGGTTCTCGACACCGTCAGCACCGGCAAGACAATTACCGAGAGTTTAGATCAGGCCGATCGGCGCAAACGGCTTTTCCCGCCAACAGTTCGGGCAATGATTGATGTCGGGGAAAGAACCGGCTCTCTTTACAACTCCTTACTATATATTTCCGAGTTTTACGAAGAGGAAGTTGACAATATGACGAAAGATATGGCAACGACTTTGGAGCCGATTCTTCTGCTGATTATCGCTTTTGTTGTCGCCTTTGTCGCCATCGCGATAATCTCCCCAATGTATCAGGTTCTAAATGTGATTAAATGA
PROTEIN sequence
Length: 405
MEKDKLQIETEKKLPEEVDKSAAIAENPPPKNQPEESKESEKEPKEKAKRGKNFLLFGISLNEKVFLAKHLSTILKAGMDLPESLRIVQRQLHGGLKNVLGDVSAKVEGGKSLNVALSEYPNVFDPLFINMVKVGEKSGTLDQSLHYLSIQLSKDAKLISKVKSAALYPLIVLSAAVVVGGGVSYFVLPKLTKLFTSFKADLPLATKILLAISNNLQHYGLWWLAGIILAIILFSVLLRVRFFRAIWNNVTLHTPVAGKIIISLNLARFSLTLGTLLKSGVAIDDALGITKEAITSIPYQKTIKMVLDTVSTGKTITESLDQADRRKRLFPPTVRAMIDVGERTGSLYNSLLYISEFYEEEVDNMTKDMATTLEPILLLIIAFVVAFVAIAIISPMYQVLNVIK*