ggKbase home page

cg1_0.2_scaffold_6012_c_9

Organism: Nitrospirae bacterium CG1_02_44_142

near complete RP 48 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 6265..7830

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD-like; K03086 RNA polymerase primary sigma factor Tax=CG_Nitrosp_01 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 521.0
  • Bit_score: 1004
  • Evalue 6.10e-290
rpoD; RNA polymerase sigma-70 factor RpoD similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 520.0
  • Bit_score: 430
  • Evalue 7.30e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Nitrosp_01 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1566
ATGAGAGAAAGGACTGAGCCTTTTGACGGAGATGAAGACAGAGAGGGGCTGCCTTTGCTGGGGGAGGCTCTGGAAGAGGAGTTTGTAGAAGAGTTGACAGAGAAGCCTCTTCTTGAGGATACGGAGCATGACCCTGTCAAGATATATTTAAAAGAGATGAGCAGTGTTCCCCTTCTCACAAAAGCGGGGGAAGTTGAGATAGCGAAAAGGATTGAAAGCGGCAGAAGGAAAATAGCGGAGGTTATTTTTGCCGTCCCGTTTGCAGTCAGCAAACTAATCGCTCTGGGAGAGCTGATTGAAAAAGGCAGCGCTCCGATAGCAGAGATAGCACAGAATGGCGAGAATGTATTTGAGGAAGACCTCTTTGTTGAAAGAAAGAGATTCTTTGATATAACGGCTCAGATAAAGAAACTGTATGAAAAGAGAGAGCTATATCTTAAAAGGCTTGCTGGTGAAGGCAGTTCGGGAGGGGAAAAAGCAATTCGTATGCTTGGGGATAATACGGCTAAAATACTGGACAATATAGATAAGCTGCGGTTAAAAGAGGGTGCGGTGGCTGTTTTTTCCGAGGAAATAAAAAATGCAATTTCAGGCATTGATGAAACATACAGAAAGCTCTCGGCTATCAGAAGAAAGCTCAGGCAGAACGGCATTAATGCTGATGCAGGCAAAGATATAAAGGTGAAGAAAAACCTGAAGGGCGGCGCAGGCGCTCTGATTAACGCCTACAATGAATGCCGGGAAGAGCTGGCAAAAAAAGAGGATGCGCTTGGCATTAAAGCAGAAGCAACAAAAAAGACAATGAAACTTCTTACAGAAGATGAGTGTGAAGTTCTTGAAGCGAAGAGAGCGCTTATAGAGGCGAACCTGAGACTTGTTATCAGCATAGCAAAAAAATACATGGGGAAGGGGTTGAGTTTTTCCGACCTGATAGAGGAAGGCAATATAGGCCTGATGAGGGCGTGTGATAAGTTTGAATACCGGAGGGGGTATAAATTCAGCACTTATGCGACCTGGTGGATAAGACAGGCGGTTACCAGGGCTATTGCAGACCAGTCGCGGACAATAAGAATTCCCGTTCATATGGTTGAGGCCATAAACCGCATAATAAAGGCAACAAGAGAGCTTGTGCAGGAGCTTGGGAGAGAACCTCTTGCAGAGGAAATTGCTTATAAGATTGAGCTGCCGGTGGAAAAAGTCAGGGGCATATTAAAGGTGTCAAGAGAGCCTGTATCGCTTGAAACCCCCATAGGAGACGATGAAGAAAGCCACCTCAGTGATTTTATTGAGGACAAGGCCGCTCTGTCTCCCCTTGACGCTGCAATACAGAATGACCTGAAGGCTCAGATAGAGAAAATGCTCTGCACCCTCAATTCAAAGGAACAGATGATTTTAAGGAAAAGATTTGGCATAGGGGATGACGCCGCGCCTCAAACGCTTGACGAGGTCGGAAAAAAATTTGAAGTTACGCGGGAGAGGATAAGGCAGATAGAGGTAGGCGCAATCCGAAAACTGAGGCACCCTTCAAGGAGCAAATGGCTCAGGGAGTTTATAAGCAGAGCGTGA
PROTEIN sequence
Length: 522
MRERTEPFDGDEDREGLPLLGEALEEEFVEELTEKPLLEDTEHDPVKIYLKEMSSVPLLTKAGEVEIAKRIESGRRKIAEVIFAVPFAVSKLIALGELIEKGSAPIAEIAQNGENVFEEDLFVERKRFFDITAQIKKLYEKRELYLKRLAGEGSSGGEKAIRMLGDNTAKILDNIDKLRLKEGAVAVFSEEIKNAISGIDETYRKLSAIRRKLRQNGINADAGKDIKVKKNLKGGAGALINAYNECREELAKKEDALGIKAEATKKTMKLLTEDECEVLEAKRALIEANLRLVISIAKKYMGKGLSFSDLIEEGNIGLMRACDKFEYRRGYKFSTYATWWIRQAVTRAIADQSRTIRIPVHMVEAINRIIKATRELVQELGREPLAEEIAYKIELPVEKVRGILKVSREPVSLETPIGDDEESHLSDFIEDKAALSPLDAAIQNDLKAQIEKMLCTLNSKEQMILRKRFGIGDDAAPQTLDEVGKKFEVTRERIRQIEVGAIRKLRHPSRSKWLREFISRA*