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cg_0.2_sub10_scaffold_23_c_117

Organism: CG1_02_SUB10_Hydrogenophilaceae_62_390_curated

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(99814..101256)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 468.0
  • Bit_score: 897
  • Evalue 9.70e-258
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 481.0
  • Bit_score: 502
  • Evalue 1.80e-139
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 481.0
  • Bit_score: 502
  • Evalue 4.90e-139
  • rbh

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Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
TTGTCCCGTTTGGCCACGCCCCAACCGGCCTTCACGATGAAGCAAAACCTACAACTCAAACTTTCCCATCAGCTTACCCTGACGCCCCAGTTGCAGCAGTCCATCCGTCTGCTGCAATTATCGAGCCAGGAGTTGAACCAGGAGATCGGCCAGATGCTCCAGGAGAACCCCATGCTGGAGCGGATCGAGGAGGGTGTCGGGCCGGTCGGCGAGGGCGAGACGCCGAGCCGGGAAGCGGAAACCGTGACCCGCGACGAGTCCGATTCGGTCTATGAAGAAATGGCCTGGGGCGACCGTCATGTCTCTGCGGGTAGCGATGACGATGACGACGACCGCGGCAACCAGCAGGCGGACGATGAAAGCCTCGGCCTGCGCCAGCACCTGCTCGACCAGGTGGCCATGATGCATTTGAGCGAGCGGGACCGGCAGTTGGTCAGCTTCATGGTCGAGGCGCTGAATGAAGACGGTTATCTGAGCCTGAGCCTGGAAGAACTGGCTCAGATGCTGCCGGCCGAGGTGGATGTCGGCGTGGACGAGTTGCTGACGGCGCTGCGCCTGTTGCAAAGCCTCGACCCGCTTGGCGTAGGCGCCCGCGACCTGGCCGAGAATCTGCGTCTTCAGTTGGGCGATCTGCCCGAGGATACCCCGTATCTGGCTCAGGCCAGGCGCTTGGTCAGCCAGCATCTCGATCTCCTGGCGGAGCGGGAATATGGCAAGCTGAAAAGGTTGCTGAACATTAGCGACGACCGCGATTTCATCGCCATCCGGCAGTTGATTACCTCGCTCAATCCGCGTCCCGCCGCCAGTTTCTCAGCCACCCGGACGCAGTATGTGGCGCCGGACGTGTTTGTGCGCAAGGTGCAGGGCGAGTGGCTGGCCAGCCTGAACCCGGAAGCGATGCCCAAGCTGCGTATCAACGAGGTTTATGCCAATATCCTGCGCCAGAACCGGGGGAGCGGCAGCCAGTTGACCGGGCAGATGCAGGAGGCTCGCTGGCTGATCAAGAATATCCAGCAGCGTTTCCAGACTATTCTGCGCGTGGCCCAGGCCATCATCGACCGGCAGCGGCTGTTTTTCGAACATGGCGACGTGGCCATGCGGCCCTTGGTGTTGCGCGAGATCGCCGAGGTGGTCGGCTTGCACGAATCCACCATCTCCCGCGTCACTAGCCAAAAGTATATGATGACGCCGCGTGGCCTCTATGAATTCAAACATTTCTTCGGCAACGCCTTGACCACCGAGACCGGCGGTGCGGCTTCAAGTACCGCGATCAAGGTTTTGATCCGGCAGTTCTTTGAGAGCGAAAGCCGGACCAGCCCCTTGTCCGACAACGCCATTTCGGAGATGCTGGGCAAACAAGGATTCGTCGTGGCCCGCCGGACCGTGGCCAAATATCGGGAGCAGCTCAACATCCCGCCCGCTAACCAACGCAAGTCGTTGTGA
PROTEIN sequence
Length: 481
LSRLATPQPAFTMKQNLQLKLSHQLTLTPQLQQSIRLLQLSSQELNQEIGQMLQENPMLERIEEGVGPVGEGETPSREAETVTRDESDSVYEEMAWGDRHVSAGSDDDDDDRGNQQADDESLGLRQHLLDQVAMMHLSERDRQLVSFMVEALNEDGYLSLSLEELAQMLPAEVDVGVDELLTALRLLQSLDPLGVGARDLAENLRLQLGDLPEDTPYLAQARRLVSQHLDLLAEREYGKLKRLLNISDDRDFIAIRQLITSLNPRPAASFSATRTQYVAPDVFVRKVQGEWLASLNPEAMPKLRINEVYANILRQNRGSGSQLTGQMQEARWLIKNIQQRFQTILRVAQAIIDRQRLFFEHGDVAMRPLVLREIAEVVGLHESTISRVTSQKYMMTPRGLYEFKHFFGNALTTETGGAASSTAIKVLIRQFFESESRTSPLSDNAISEMLGKQGFVVARRTVAKYREQLNIPPANQRKSL*