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cg2_3.0_scaffold_23799_c_1

Organism: CG2_30_FULL_CPR2_33_46_curated

near complete RP 49 / 55 MC: 2 BSCG 46 / 51 ASCG 11 / 38
Location: comp(665..2179)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_CPR16-01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 504.0
  • Bit_score: 963
  • Evalue 1.20e-277
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 358.0
  • Bit_score: 452
  • Evalue 1.70e-124
similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 359.0
  • Bit_score: 519
  • Evalue 3.10e-144
  • rbh

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Taxonomy

CG_CPR16-01 → CG_CPR16 → Bacteria

Sequences

DNA sequence
Length: 1515
ATGAAAAAAAATAAGGTAAAAAAGGTTTTAAAGAAAGCTGTAAAATCAAAGACTTCTTCAATTAAAAAACCTAATAAGAAAAAAAATGTAGTTTCTAAAAAGAAGCCAAAGGCAACTAAAGTACTAAAGAAAAAGAGTCAAAATAAAAAAAAGACCTTATCCTTAAAGAAGAAAGTTAAAGTTGTTAAAAAACCCAAAGGAAAGATACTAAATAAAAAGCAAGCTAAAAAGACTAAGTCTGCAAAAGTAAAAAAAGTTCAGAAAAAACCCGTAAAAAAGATTGCAAAGAAAAAAGCTAAAAAAGTTAAGGTGGTTAAAAAAGTTAAAAAAGTAAAGCAATCTGTTAAAAAGAAACCGAAAAAACCCGTTATAAAATCAACCGCAAAAGTAAAAAAAGCTGAAAAGCAGATTAAAGAAATAAAAGTAGGTGATAAAGCTATTTCCAAGGATGAAGTGGAGACTTTAATAAATAAAGGCAAAGAGCAGGGGTTTGTTACACAACAGGAAATAATGGGTGCGGTTCCAGATCTAGAAGAACATATTGATGCTGTTGATGAATTATATTCTAAGTTGATGGATATGGGTGTTGAAATTTTAGATGTGAAAGATAGGATGATCTGGGAAGACGAAGAAGATGAGGATGCAGAAGCAAAGGCAATAATAGCATCCGAAGAAAATTTATCCCATATTTCAGATGATTCCGTAAAAATGTATTTTAGAGAAATTGGTAGAGTGCCTCTTTTGAAGGCAATTGAAGAAGTTGAACTTGCTAAAAAAATTGAAAAGGGTGATCAATCTGCAGCCAGAAAATTAGCAGAAGCAAATTTAAGATTAGTAGTTTCAATCGCTAAAAAATATATTGGTAGAGGCTTGGAACTTATTGATTTGATTCAGGAAGGCAACACAGGCTTATTAAGAGCAGTTGAAAAATTTGACTATACTAAGGGATATAAATTTTCAACTTATGCTACGTGGTGGATCAGGCAGGCAATAACAAGGGCAATTGCAGACCAAGCCAGAACAATTAGAATCCCTGTTCATATGGTTGAAACAATAAATAAATTGATCAGAGTTCAGAGAAGGTTAGTTCAGGATTTAGGACGCGAACCATTACCTGAAGAAATCGCTTCAGAAATGGAAATTGATGTAGATAAGGTAAGACATATTATCAAAATTTCCCAAGAAACTGTTTCCTTGGAAGCGCCTGTTGGAGAAGAAGAAGATTCAAGATTAGGAGACTTTATTGAGGACGAAGACAGTTTATCTCCGTATGAAGCAGCAACTTATCAGTTGCTGAGAGGGCATATTCAGGATATCCTTCAATACTTATCTCCAAGGGAGCAAAAGATATTAAGAATGAGATTTGGTTTGGATGACGGCAGGAGTCATACTCTAGAAGAAGTTGGTCAGGAATTTGGGGTAACTCGGGAAAGAATCAGACAGATAGAAGCAAAAGCACTCGCTAAACTTAGAAGACACAGAGAAAGTAAAAAATTGAAAGATTACTTACGTTAA
PROTEIN sequence
Length: 505
MKKNKVKKVLKKAVKSKTSSIKKPNKKKNVVSKKKPKATKVLKKKSQNKKKTLSLKKKVKVVKKPKGKILNKKQAKKTKSAKVKKVQKKPVKKIAKKKAKKVKVVKKVKKVKQSVKKKPKKPVIKSTAKVKKAEKQIKEIKVGDKAISKDEVETLINKGKEQGFVTQQEIMGAVPDLEEHIDAVDELYSKLMDMGVEILDVKDRMIWEDEEDEDAEAKAIIASEENLSHISDDSVKMYFREIGRVPLLKAIEEVELAKKIEKGDQSAARKLAEANLRLVVSIAKKYIGRGLELIDLIQEGNTGLLRAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRRLVQDLGREPLPEEIASEMEIDVDKVRHIIKISQETVSLEAPVGEEEDSRLGDFIEDEDSLSPYEAATYQLLRGHIQDILQYLSPREQKILRMRFGLDDGRSHTLEEVGQEFGVTRERIRQIEAKALAKLRRHRESKKLKDYLR*