LOCUS ACD29_28 6265 bp DNA linear BCT JUL-24-2026 DEFINITION ACD29_28, contig. ACCESSION ACD29_28 VERSION ACD29_28.1 GI: KEYWORDS . SOURCE ACD29 ORGANISM ACD29 uncultured bacterium, unknown, unknown, unknown, unknown, Bacteria. COMMENT Data sourced from ggkbase. For additional details see https://ggkbase.berkeley.edu/organisms/21 FEATURES Location/Qualifiers source 1..6265 /organism="ACD29" /mol_type="genomic DNA" gene complement(<2..868) /locus_tag="ACD29_28_1" CDS complement(<2..868) /product="2..868 - (rbs_motif=GGA/GAG/AGG rbs_spacer =5-10bp)" /codon_start=1 /transl_table=11 /translation="MRTSIENTCKTYAIEVVWNLLRKNPAVNTLFHQHPYLAHNADVI LLIAVLTENDLIDEPTIQIFTKILKNVIVYSQENIRAPVITDPQNYDEIKKNCLWSFF SILKKSIVSLHVTELLSSENLSKIFLRNNEVRPTVDIINICKFIAFLQQLDMLTRNHF NNIFEKSVGSLYHRLGCLAKRFYFLEKRLDEVEKSFFISIFCEEVLAKRKEGETVLQK NREMLYEILHDIWMHGPMQDNDFGHYTQFFKDFIGEFEQIKFEKTNLEKEIGIFFKNY RAWQLNPIRTTGF" gene complement(853..1077) /locus_tag="ACD29_28_2" CDS complement(853..1077) /product="853..1077 - (rbs_motif=3Base/5BMM rbs_spacer =13-15bp)" /codon_start=1 /transl_table=11 /translation="MLKSFFKTHHDTPKTFADLNKKFADLYEKKLLTLQEIKTILVQY TIPLRYSSHVFFPIKNLSFPLKGDKKCVLQ*" gene complement(1077..1277) /locus_tag="ACD29_28_3" CDS complement(1077..1277) /product="1077..1277 - (rbs_motif=GGA/GAG/AGG rbs_spacer =11-12bp)" /codon_start=1 /transl_table=11 /translation="MRPELITLTKISETNLFINDLCIRFNDLIKPIFEKYPDLIHNMH VINILFYLKQKNFYDVARKMKK*" gene 1389..2390 /locus_tag="ACD29_28_4" CDS 1389..2390 /product="TIM-barrel protein, yjbN family n=1 Tax =Methylophaga thiooxidans DMS010 RepID=C0N2X0_9GAMM (db=UNIREF evalue=7.0e-101 bit_score=370.0 identity=57.0 coverage=91.3173652694611)" /codon_start=1 /transl_table=11 /translation="MHCFLLLCYTALIMMQLNRKFCVAPMMAYTDCHFRYLLRILSKH SVLYTEMVTAPAIIYGDKNYLLNFSEKEHPVALQLGGSDPDQLVQSAKIGEKWGYDEI NLNVGCPSDRVQKGCFGVALMKQADLVAEIFMKMQDAIRIPVTIKTRLGVDEFDSEEF LHHFIKKIYDAGCRVFMMHARKAWLSGLSPKENRDVPPLCYERVYRLKKLFPNCEIII NGGIETLESCEDHLKLVDGVMLGRAICSNPFLLSQVDKIFYGSNKIMTREAALSDYMP YILKTYAQGVSMQKLTRHLIGLYQGQPGARQWRRLLSSDIKDDRQLIRAISRYSSLS*" /db_xref="nhl:Nhal_0359" /db_xref="C0N2X0_9GAMM" /db_xref="3.20.20.70" /db_xref="PF01207" /db_xref="TIGR00742" /db_xref="IPR004653" /db_xref="IPR001269" /db_xref="IPR013785" gene complement(2372..3199) /locus_tag="ACD29_28_5" CDS complement(2372..3199) /product="Putative uncharacterized protein n=1 Tax =Nitrosococcus halophilus Nc4 RepID=D5BVY7_NITHN (db=UNIREF evalue=1.0e-71 bit_score=273.0 identity=44.78 coverage=96.0144927536232)" /codon_start=1 /transl_table=11 /translation="MSLGNWLVQKLGHYLLKEITPARGYLCDFSRICHEIRPADVLLI EGRNRISHMVQHITESPWSHSALYIGRIHDLEDPKIREYVQHHYKGSASEQLLVESVV GFGTIIAPVSKYREEHIRVCRPTGLSHIDAQNVITFSVKTIGREYDIRHFFDLGRFIF ASRLIPRRWKSSLFSVDAGKVEQDICSTMIAKAFGSIKFPILPLIRINRSNRLEIIRR NPDLYAPCDFDYSPYFDIIKYPMLPVTGYSAYRHLPWHEELMSNDDQGIVTHHDNEE*" /db_xref="nhl:Nhal_2481" /db_xref="D5BVY7_NITHN" /db_xref="PF05708" gene complement(3213..4583) /locus_tag="ACD29_28_6" /gene="purB" CDS complement(3213..4583) /gene="purB" /product="purB; adenylosuccinate lyase (EC:4.3.2.2)" /codon_start=1 /transl_table=11 /translation="MELSSLTAISSLDGRYAKKTEQLRPIVSEYGLIFYRLIAEIHWL IALSENDQINEIPKLTENDKNNLRLIMNQFNQAEAEKIKAIEATINHDVKAVEYYLRE KLSLDKNLKNLCAWIHFACTSEDINNLAYALMQKTLRDQIIEPAILNLISAIDTLAKK TAEFSMLSRTHGQPASPTTLGKELKNFAVRLKLQLKLLLTIPMMGKCNGAVGNFNAHV IAYPEVNWLLLSKNFVESLGLHYNEYTTQIEPHDFLAQFLNALSACHLIMIDFNRDIW GYISQDYFTQMKSEQEVGSSTMPHKINPIDFENAEGNLGLSIALANHLANKLPISRFQ RDLSDSTVLRNLGSIFGYAIIAYQAMLSGLNKLKPNKTQLENTLNQHWEILTEAIQTV MRRYNITDAYEQLKILSRGEKIDSAKLNLFIDQLTIPDATKKRLKKLTPCNYTGLATE LANKEI*" /db_xref="cbd:CBUD_0889" /db_xref="A9KFH8_COXBN" /db_xref="4.3.2.2" /db_xref="PF00206" /db_xref="PF08328" /db_xref="TIGR00928" /db_xref="IPR020557" /db_xref="IPR004769" /db_xref="IPR008948" /db_xref="IPR022761" /db_xref="IPR013539" /db_xref="IPR000362" gene 5097..5783 /locus_tag="ACD29_28_7" CDS 5097..5783 /product="DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax =Pseudomonas mendocina ymp RepID=A4XTF8_PSEMY (db=UNIREF evalue=7.0e-69 bit_score=263.0 identity=57.4 coverage=95.1965065502183)" /codon_start=1 /transl_table=11 /translation="MDVINAIAKRYNVPVIEDAAQSFGATYKNRKSCNISEIACTSFF PSKPLGAYGDGGACFTNDTALAKKMRLIINHGQDVRYHHVALGMNGRMDTLQAAILLE KLKFFDHEVKQRQQVANWYHDGLTAINIQPPIILDYNNSVYAQYTIQVDHRDLVQKKL SELDIPTAVHYPIGLHQQPYVRTQHKQDVQSFPVTELCAKRVLSLPFYPSMSREDVEI VCERLKSVMN*" /db_xref="pmy:Pmen_1860" /db_xref="A4XTF8_PSEMY" /db_xref="PF01041" /db_xref="IPR015424" /db_xref="IPR000653" /db_xref="IPR015421" /db_xref="IPR015422" gene 6101..>6265 /locus_tag="ACD29_28_8" CDS 6101..>6265 /product="3-hydroxyacyl CoA dehydrogenase n=6 Tax=Coxiella burnetii RepID=B6J0L0_COXB2 (db=UNIREF evalue=8.0e-15 bit_score=82.8 identity=63.64 coverage=98.1818181818182)" /codon_start=1 /transl_table=11 /translation="MALSEFQKIIQINLIGTFNMMKFSAEKMSKQNIISQNGERGVII NTASVAAFEGQ" /db_xref="cbd:CBUD_0912" /db_xref="B6J0L0_COXB2" /db_xref="1.1.1.35" /db_xref="IPR002198" ORIGIN 1 AAAAACCAGT TGTGCGAATT GGGTTTAATT GCCAAGCTCG ATAGTTTTTA AAAAAAATCC 61 CTATTTCTTT TTCTAAATTC GTTTTTTCGA ATTTAATTTG CTCAAACTCG CCAATAAAAT 121 CTTTGAAAAA TTGAGTGTAA TGACCAAAAT CATTGTCTTG CATAGGGCCA TGCATCCAAA 181 TGTCATGCAA AATTTCGTAA AGCATCTCTC TATTTTTTTG TAATACCGTT TCTCCTTCTT 241 TTCTTTTTGC TAGGACTTCT TCACAAAAAA TACTAATAAA AAAACTTTTC TCTACCTCGT 301 CTAATCTTTT TTCCAAAAAA TAAAATCGTT TTGCAAGACA ACCTAGGCGG TGATACAAAG 361 ATCCGACAGA TTTTTCAAAA ATATTATTAA AATGGTTTCG CGTTAACATG TCGAGCTGTT 421 GTAAAAATGC GATGAATTTA CAAATATTGA TAATATCCAC AGTTGGTCTA ACTTCATTAT 481 TTCTGAGAAA AATTTTAGAT AAATTTTCTG AGGAAAGTAA TTCAGTGACA TGCAAACTCA 541 CGATAGATTT TTTTAAAATT GAAAAAAAAC TCCACAAGCA ATTTTTTTTA ATTTCGTCGT 601 AATTTTGAGG ATCTGTGATT ACTGGTGCAC GAATGTTTTC TTGAGAATAA ACAATAACAT 661 TTTTTAATAT TTTCGTGAAA ATTTGAATTG TGGGTTCATC GATTAGATCA TTTTCTGTTA 721 GTACAGCTAT CAATAAAATT ACATCTGCAT TGTGTGCCAA GTAAGGATGC TGATGGAACA 781 ATGTGTTGAC AGCAGGATTT TTTCTTAATA AATTCCAAAC AACTTCGATC GCATATGTTT 841 TGCATGTATT TTCTATTGAA GTACGCATTT TTTATCCCCT TTTAAAGGGA ATGATAAGTT 901 TTTGATTGGA AAAAATACAT GAGAGCTGTA TCTTAGTGGG ATCGTGTATT GAACCAAAAT 961 CGTTTTTATT TCTTGTAGTG TCAATAATTT TTTTTCATAT AAATCAGCAA ATTTTTTATT 1021 GAGATCTGCA AATGTTTTGG GTGTATCGTG ATGTGTTTTA AAAAATGACT TCAACATTAT 1081 TTTTTCATCT TCCGTGCAAC GTCGTAAAAA TTTTTTTGTT TTAAATAAAA AAGAATATTA 1141 ATGACATGCA TATTATGAAT TAAATCAGGG TATTTTTCGA AAATAGGTTT AATCAAATCG 1201 TTAAATCGTA TACACAAATC ATTGATGAAT AAATTTGTCT CGCTTATCTT AGTGAGCGTG 1261 ATTAATTCTG GTCGCATAAA AAAATATACC TTATTATTTT TTTTACGCAT TCTAGTCTGG 1321 ACAAACTCTT CTTAGCAAGT CCTATCAAAA AAAATAAAAA TTTAATGTTT TTTTAAGGAT 1381 TGTTTAAAAT GCATTGTTTT TTATTACTGT GTTACACTGC GTTAATTATG ATGCAATTGA 1441 ATAGAAAATT TTGTGTTGCT CCGATGATGG CTTATACCGA TTGCCATTTT AGATATTTAT 1501 TGCGCATTTT ATCCAAGCAT TCTGTTTTGT ATACTGAGAT GGTGACGGCA CCTGCTATTA 1561 TTTATGGTGA TAAAAATTAT TTATTAAATT TTTCAGAAAA AGAGCATCCA GTTGCATTGC 1621 AATTGGGTGG ATCAGATCCG GATCAATTAG TTCAAAGTGC AAAAATAGGT GAAAAATGGG 1681 GTTATGATGA AATCAATTTA AATGTTGGTT GTCCCAGTGA TCGCGTGCAA AAAGGATGTT 1741 TTGGTGTTGC ATTAATGAAG CAAGCTGATT TAGTTGCTGA AATTTTTATG AAAATGCAAG 1801 ATGCAATTCG TATTCCTGTT ACGATTAAAA CACGTTTGGG CGTTGATGAG TTTGATTCCG 1861 AGGAATTTTT ACATCATTTT ATTAAAAAAA TTTATGATGC TGGTTGTCGT GTTTTTATGA 1921 TGCATGCTAG AAAAGCCTGG TTATCAGGAT TGAGCCCAAA AGAAAATCGT GATGTGCCGC 1981 CATTGTGTTA TGAGCGCGTG TATCGATTAA AAAAATTATT TCCGAATTGT GAAATTATTA 2041 TTAATGGCGG TATTGAGACG TTAGAAAGTT GTGAGGATCA TTTAAAATTA GTTGATGGCG 2101 TTATGTTGGG ACGTGCAATT TGTTCGAATC CGTTTTTATT ATCTCAAGTG GATAAAATTT 2161 TTTATGGTTC CAATAAAATC ATGACGCGCG AAGCAGCGCT TTCTGACTAT ATGCCTTATA 2221 TTTTAAAAAC ATATGCTCAA GGTGTGTCGA TGCAGAAATT GACGCGTCAT TTGATTGGAT 2281 TATATCAAGG TCAACCTGGC GCAAGACAAT GGCGTAGATT ATTGAGCAGT GATATAAAAG 2341 ATGATCGTCA GCTTATTCGT GCTATATCTC GTTATTCTTC ATTGTCGTGA TGCGTGACAA 2401 TACCTTGATC GTCATTGCTC ATCAGTTCTT CATGCCAAGG TAGATGGCGA TAAGCGCTAT 2461 AACCCGTTAC AGGCAACATG GGGTATTTGA TAATATCGAA GTAAGGCGAG TAATCAAAAT 2521 CGCACGGCGC ATACAAATCG GGATTGCGAC GAATGATTTC AAGACGATTG CTGCGATTAA 2581 TACGAATCAA AGGCAAAATA GGAAATTTAA TGGAGCCAAA GGCTTTCGCA ATCATCGTTG 2641 AACAAATATC CTGTTCCACT TTTCCTGCAT CGACGCTAAA TAAACTAGAT TTCCAGCGAC 2701 GTGGAATGAG TCGACTGGCG AAAATAAATC GTCCCAAATC GAAAAAATGT CGAATATCGT 2761 ATTCGCGGCC AATTGTTTTA ACTGAAAAAG TAATGACATT TTGAGCATCA ATATGCGATA 2821 AACCAGTTGG TCTGCAGACA CGAATATGTT CTTCGCGATA TTTAGAGACA GGTGCAATAA 2881 TAGTGCCAAA ACCGACAACA GATTCAACCA ATAATTGCTC TGAAGCAGAG CCCTTGTAAT 2941 GATGCTGCAC GTATTCACGT ATTTTTGGAT CTTCTAAATC ATGAATGCGC CCAATATATA 3001 AAGCGGAATG ACTCCATGGG CTTTCTGTAA TATGCTGCAC CATATGACTA ATTCGATTAC 3061 GACCTTCAAT GAGCAGCACA TCAGCTGGAC GAATTTCATG ACAGATACGT GAAAAATCAC 3121 ATAAATACCC ACGAGCAGGT GTGATTTCTT TCAGTAAGTA ATGTCCTAAT TTTTGTACGA 3181 GCCAGTTTCC AAGTGACATA GTAAAAATCC CGTTAAATTT CTTTGTTGGC CAATTCTGTC 3241 GCTAATCCCG TGTAATTGCA TGGTGTTAAT TTTTTAAGTC GTTTTTTTGT TGCATCTGGA 3301 ATAGTTAATT GATCAATAAA TAAATTTAAT TTTGCTGAGT CTATTTTTTC ACCACGAGAT 3361 AAGATTTTCA ATTGTTCGTA AGCATCAGTA ATATTATAAC GCCTCATCAC AGTTTGAATT 3421 GCTTCAGTTA ATATTTCCCA ATGTTGATTC AATGTATTTT CTAACTGTGT TTTATTCGGC 3481 TTTAACTTAT TTAATCCAGA TAACATGGCT TGATAAGCGA TGATGGCATA ACCAAAAATG 3541 CTTCCCAAGT TTCGCAACAC TGTCGAATCA GATAAATCTC GTTGAAAACG GGAAATTGGT 3601 AACTTATTGG CAAGGTGATT CGCCAACGCA ATAGACAATC CCAAATTACC TTCTGCATTT 3661 TCAAAATCAA TGGGATTAAT TTTATGCGGC ATGGTAGATG AGCCAACTTC TTGTTCTGAT 3721 TTCATTTGCG TAAAATAATC TTGTGAAATA TAGCCCCAAA TATCACGGTT AAAATCAATC 3781 ATGATGAGAT GACAAGCTGA CAAAGCATTT AAAAATTGCG CGAGAAAATC ATGCGGCTCA 3841 ATTTGCGTTG TATATTCGTT ATAGTGTAAC CCCAAGCTTT CTACAAAATT TTTTGATAAC 3901 AATAACCAAT TCACCTCAGG ATAAGCAATA ACGTGTGCAT TAAAATTACC GACAGCGCCA 3961 TTGCATTTTC CCATCATCGG AATCGTTAGT AGTAATTTTA ATTGCAGTTT TAATCGTACT 4021 GCAAAATTTT TCAATTCTTT TCCCAGCGTG GTGGGTGAAG CGGGTTGACC ATGTGTTCGA 4081 GATAGCATAG AAAACTCTGC TGTTTTTTTT GCAAGCGTAT CTATTGCTGA AATTAGATTT 4141 AAAATGGCTG GCTCAATAAT TTGATCCCGT AAAGTTTTTT GCATTAAAGC ATAAGCTAAA 4201 TTATTAATAT CTTCTGAAGT ACACGCAAAG TGAATCCAAG CACATAGATT TTTTAAATTT 4261 TTATCTAGCG ATAATTTTTC ACGCAAATAA TATTCAACTG CTTTAACATC ATGATTTATT 4321 GTTGCTTCGA TTGCCTTGAT TTTTTCAGCT TCTGCTTGAT TAAATTGATT CATAATGAGT 4381 CGTAAATTAT TTTTATCGTT TTCAGTTAAT TTTGGAATCT CGTTTATTTG GTCATTTTCA 4441 GATAACGCAA TGAGCCAGTG GATTTCTGCA ATCAACCTAT AGAAAATCAA CCCATATTCA 4501 CTTACAATTG GGCGCAATTG TTCTGTTTTT TTCGCGTACC GCCCGTCCAA AGAGGATATA 4561 GCGGTGAGTG AAGACAATTC CATTGCAATC TCTTTTTAAT TGGAAACAAC AATATAATAC 4621 CAGTATGCAA TATTAAGCGA GAAATGAAAA TGAAATTTAT CGATTTAAAA GCACAATATT 4681 TACAACATAA AATAAAAATT GATGCTGCCA TTTCAGGTGT TTTGAGTCAT GGGCAGTTTT 4741 TATTTGGGCC TGAGGTGTCA GAGCTTGAAA AAGCATTGGC AGATTATGTT GGGTCAAAGA 4801 ATTGCATTGT TATGTCCAGC GGAACAACAG CACTGCATGT TGCATTGATG GCTTTGGATA 4861 TTCAGCCCGA TGATGAGATT ATCACCGTTC CATTTAGTTT TTTTGCAACG GCTGAAGTTG 4921 CCTATTTGAT GCGAGCAAAG TTACATTACG TTGAGATTGA TCGCAATACT TACCTCATGA 4981 ATCCTGATTT GCTGGAAGCT GCAATTACCA AAAAAACAAA AGCAATCANN NNNNNNNNNN 5041 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNCAATATGG 5101 ATGTGATTAA CGCGATTGCA AAACGATATA ACGTTCCAGT GATTGAAGAT GCAGCGCAAA 5161 GTTTTGGCGC AACTTATAAA AATAGAAAAT CCTGCAATAT CAGTGAAATT GCTTGCACGA 5221 GTTTTTTCCC CTCAAAACCA TTGGGTGCTT ATGGTGATGG TGGAGCTTGT TTTACAAATG 5281 ATACGGCATT AGCAAAAAAA ATGAGATTGA TCATTAATCA TGGCCAAGAT GTGCGTTATC 5341 ATCACGTTGC GCTAGGTATG AATGGTCGTA TGGATACACT TCAAGCCGCT ATTTTGCTTG 5401 AAAAATTAAA ATTTTTTGAT CATGAGGTAA AGCAAAGGCA ACAAGTGGCC AATTGGTATC 5461 ATGACGGCTT GACTGCCATT AATATTCAGC CCCCCATTAT TTTGGATTAC AATAATTCTG 5521 TTTATGCGCA ATATACCATT CAGGTTGATC ATCGTGATTT GGTACAAAAA AAATTATCTG 5581 AACTGGATAT TCCAACTGCA GTGCATTATC CAATCGGTTT GCATCAACAA CCTTACGTGC 5641 GTACCCAGCA TAAACAAGAT GTGCAATCTT TTCCTGTGAC TGAATTATGC GCAAAACGTG 5701 TCTTAAGTTT GCCATTTTAT CCCAGCATGA GCAGAGAAGA TGTCGAAATA GTTTGCGAAA 5761 GATTAAAATC TGTCATGAAT TAATTTTATT TTAATTTCAA TAGGATTTTT TTAATATGGA 5821 CATTAAAAAT AAAGCAATTG TGATTACAGG TGCGNNNNNN NNNNNNNNNN NNNNNNNNNN 5881 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNG CTAAAATATT 5941 TCGTTTAGAT AAAAATAAAA TTTCTGACGA TATTATTGAG TGTGATATTA CAGATGAAAA 6001 TAATTTAAAA AAAACAATAG ATTCTTTTGA TGCAATACAT GCCGTTGTTC ATTGCGCAGG 6061 CATTTCACAT GCAAAAAGGT TGATTGGAAA AAATGGTGCA ATGGCTTTAT CTGAATTTCA 6121 AAAAATCATT CAGATTAATT TAATAGGTAC TTTTAATATG ATGAAATTTT CTGCTGAAAA 6181 AATGTCAAAG CAGAATATTA TTTCACAGAA CGGCGAACGT GGTGTTATCA TTAATACCGC 6241 ATCTGTTGCG GCTTTTGAGG GGCAA //