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cg2_3.0_scaffold_21830_c_2

Organism: CG2_30_FULL_CPR_40_16_curated

partial RP 35 / 55 MC: 1 BSCG 33 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(832..2382)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=uncultured bacterium RepID=K2FQK8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 350.0
  • Bit_score: 175
  • Evalue 1.50e-40
  • rbh
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 308.0
  • Bit_score: 181
  • Evalue 2.90e-42
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 447.0
  • Bit_score: 171
  • Evalue 6.10e-40

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
ATGATTGATAGGATCGCAACAACTGATATAAATGTTGAGATACCTGTGATCTATCAACATTTATTCAGTAAAGCTAAATATTGGGGCTTTATTTCTCCTTCAATTATTGCCCGATATCTGACTAAGGGACTATCGCAGCGTAAAAAATTAGCAGAAACTCGTTGGCTGATTGATGTATTGGCCACTTTTCAAGTCCAGTTTATTAATGATGAAGCATATAGACAAATTGTTGATAATCATGAAAGAAAAGCATTGGAACTTGAGGAACGTTTTGATCTTCCCATTGAGAAAATTTTTAGTTATCTATATAACGTTATGGAGTTGACTATTGAGGAGATATCCCAATTTCTCTCACTGTCTCCCCAACTGATTATAAATTTTCTTGAAGATTTAGATTTTAAACGTCGCTCCAATGATGTTACTCGTTATTTTGTTCCAGAGGTTGAAGAAGCTATTGAAGAAGGAGGACAGATTTCAGAAAAATTGACTTCAATGCGTGTATCTCGTCAGCCATTGCCTTCAGAAGATTTAGAAACTGTTGGTCCGCTTTTACGTAAAATGGATAAGGCGGAAAGACAGAGGATTAAACACTCCATAGATTTTTACATGAGTCGTAAAAATAGCTCACTTTCCCAAGCTTATTATTTAGAAGTCAGTCAGTACCGTCTTCTTAATGCAGATGAGGAAAAAATTTTAGCTAAGCTTTTTGCCAAAGGGGACATCACAGCTCAAGATCACTTTGTTCTGGCTAATCTGCGTCTGATTTTTCGTATTGCTAATATATATTTTAGGCGCTATGAAGGGAAACTAAACGGAATGGGTCTTTCTGATATTATTCAAGAAGGATTTTTTGGACTAATGCGGGCTACGACTATGTTTGATCCAGAGTTGGATTATAAATTTTCAACTTATGCAACCTGGTGGATTGAGCAAGCTATTGAACGCGCTATCTATGAGCAGGGGTTTTTAGTTCGTAAGCCAGTGCATGCTCATGAAAAACTTCAAGAGATTAGAAGAGTTCAGTATAATTATAATCAAAAGTATGGTAGTGCGCCATCTGTCCAAGAGCTAGCTGCCCTTACTGGTTTTACTTTGAATATTATTCGTGACATTCTTTGGGCTTCAGGAGGCGATGTCTCTATTAATAAAAAGCCAGACAACAATGGAAATGGAGATGATCAAGAGTTAGCTGAATATCTTTTAATTGACACCGAGATTGATCCTTTGTTATTAAATGCAGGATTTCGTAAACGTGAAGAATTTCGAAATCACGAGAAAAAAATTTGCAGCGTTATTAGACAAATGCCTTTGCGAGATCAGATAGTAGTTAGTGGTCGTTTTGGCATATTAGGATTGCCAGAAATGACCTTAGAGACCATTGGTTCCAAAAATCAGTTGACTCGTGAACGTATTAGGCAGATTGAAGGGTCTATTTTGGAGCAGCTAGGCGGTGATGCTGAATCAACAAAAGAGTACCTTAAAAATCTTTTCAAGAAAATGAGAGTTCTTGACGAAGCCTTGGAGGGATATTCATGTGCAGCCCAATTGTAA
PROTEIN sequence
Length: 517
MIDRIATTDINVEIPVIYQHLFSKAKYWGFISPSIIARYLTKGLSQRKKLAETRWLIDVLATFQVQFINDEAYRQIVDNHERKALELEERFDLPIEKIFSYLYNVMELTIEEISQFLSLSPQLIINFLEDLDFKRRSNDVTRYFVPEVEEAIEEGGQISEKLTSMRVSRQPLPSEDLETVGPLLRKMDKAERQRIKHSIDFYMSRKNSSLSQAYYLEVSQYRLLNADEEKILAKLFAKGDITAQDHFVLANLRLIFRIANIYFRRYEGKLNGMGLSDIIQEGFFGLMRATTMFDPELDYKFSTYATWWIEQAIERAIYEQGFLVRKPVHAHEKLQEIRRVQYNYNQKYGSAPSVQELAALTGFTLNIIRDILWASGGDVSINKKPDNNGNGDDQELAEYLLIDTEIDPLLLNAGFRKREEFRNHEKKICSVIRQMPLRDQIVVSGRFGILGLPEMTLETIGSKNQLTRERIRQIEGSILEQLGGDAESTKEYLKNLFKKMRVLDEALEGYSCAAQL*