ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cg2_3.0_scaffold_1741_c_2

Organism: CG2_30_FULL_Parcubacteria_OD1_44_18_curated

near complete RP 40 / 55 BSCG 42 / 51 ASCG 8 / 38 MC: 1
Location: 1832..5005

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_CPR05_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2089
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 999.99
  • Bit_score: 1240
  • Evalue 0.0
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C611A similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 999.99
  • Bit_score: 1447
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR05_02 → CG_CPR05 → Bacteria

Sequences

DNA sequence
Length: 3174
ATGACTAAAAATTTTTCGAGATACCAATTTAGTTCCGATTTTCCCGAGTTAGCGGAAATTCAGTTGAATTCTTACAAGTGGTTTATCGACCAGGGTCTGCGGGAACTTTTTGATGAAGTTTCTCCGGTTCGCGACTGGTCGGGCGAGGAATTAGAGTTATATTTTCGCGATTACTATTTTGAAGAGCCTAAATTTAGCGAGGTTGAATCGCGAATAAGAGGCGCATCGTACGAAGCTCCTTTGCGATGCCTTCTGAATCTTATTAATAAAAAAACAAAACAAACCAGAGAACAAGAAGTCTATCTGGGTGATTTTCCGTTGATGACTGATCGCGGCACTTTTATTATTAACGGCGTTGAGCGTGTCGTAGTTTCTCAGCTGATCAGGTCGCCGGGAATATTTTTTACCGTCAGTTATCTTCGCGGTGAACGACAATTTTTTGGCGCCAAGGTTATTCCTAATCGCGGGGCTTGGTTGGAGTTCGAGGTTGATGGCGACGGAGTGATTTCTGTTAAAATCGATCGAAAGCGGAAAATTGCCGCCACTTCCTTGTTGAAGGCGTTTGGCATGGAAAGCGAAGAAAAAATCAAGAAGACCTTTGCGGATGTTGACACCAACAAAGAACTAAAATTTATTGACGTTACCCTAAGCAAAGATCAGGCAAAAAATCAAGGAGAAGCGTTTATCGAAATTTACAAACGCCTGCGGCCGGGCGATTTGGCCGCGGTTGATAACGCGCGACAACTGATCGAGGCGATGTTTTTTAATTTTGAAAGGTACGACTTATCTAAGGTTGGCCGCTGGAAGCTTAATCAACGACTTAGTATTAATAAACCCACAACCAAAGAAAACCGAGTTTTCAGCTTGGATGATCTTGTCTCAATACTTAAGGAAATCATCCGGCTGAGCAATAGTTCCGACGCCCATCCCGACGATATTGATCATCTTGCTAACCGTCGCATCAGAAGTGTCGGCGAATTGCTCCAGAATAAATTGAGAATCGGTTTGGCGCGAACCGAAAGAATCATAAAGGACAGAATGAGTATTTTGGACGTCGAAACGTTAATGCCCAGCCAATTGATTAACGCCCGTCCCTTTATTGCCTCGGTCAAGGAATTTTTTACTGTTTCGCAGTTGTCGCAATTTATGGATCAGGTCAATCCTTTGGCGGAACTTGAACACAAGCGCCGGGTTTCTGCTATGGGACCGGGCGGGTTAACGCGGGAAAGAGCGGGTTTTGAGGTAAGAGATGTTCACTCTACTTATTATGGCCGGATTTGCCCGATTCAAACGCCAGAGGGTCCGAACATTGGATTGATCGGTCACTTAGCGTGTTTCGCGCGACTCAACGAATACGGGTTTATTGAAACACCCTATCGAAAGATAATCGGCGGCCGTCTTTCCAAGAAAATTGATTTTCTTAACGCGTTTGAAGAACAAATGGTTAACATTGCTCATGCCGGCGTTGCTCTTGATAAAAACGGCAATCTTTTAGAGTCTCGAGTGGAGGCGCGCGTGAAGGGTCAGCCGAGTATTACCAAGCGGGAAAAAATTGATTATATCGACGTTTCTCCTCAGCAGTGCGTCTCGGTCGCGACCGCGCTGATTCCGTTTTTGGAGCATGACGACGCAAACCGCGCTTTAATGGGTTCGAATATGCAGCGCCAGGGCGTTCCTTGTATTAAGCCCCAGGCGCCGTTGGTGTCAACTGGCTTGGAGGAAAAGGCTGCCTATGATTCTGGCCATTTGGTGATTAGTCAGGACGATGGCGTGATTGATGCAGTAGATGCCAACAATATTCGTGTTAAGAGCGCAAGGAAGGCAAAAACTTATCCACTTCATACTTTTGTTCGTACTAACCAATTTACCTGTGCTACTCAACGGCCGATAGTTAAACGGGGGCAAAGGGTGAAAAGAGGAGAGGTTTTGGCAGATGGGATGGCGACCGAGAATGGCTGTTTGGCTCTCGGGCAAAATCTATTGTGCGCTTTTTTGCCTTGGCGGGGAGCTAATTTTGAAGACGCTATTATTCTTTCTGAAAAACTGGTTAAAGAAGACCGCTTTACGTCAATCCATATAGAAGATTTTATTTGCGATGTTCGGGAAACTAAACTTGGTCCGGAAATAACGACGCCTGATATTTCGAATGTCAGCGAAGAAAAGCTTAAAGACTTGGATGAAGAGGGTGTCGTTAGAATTGGCGCCGAAGTTGGCCCTAATGATATTTTAGTCGGAAAAATTTCTCCCAAAGGGGAGGTTGATTTATCTGCGGAGGAGAGATTGCTGAGAGCAATTTTCGGCGAAAAAGCGCGGGATGTTAAAGATACCTCGCTGCGTTTGCCACATGGTAAAAGAGGTCGAATTGTTGAAATTCATACATTTTCCCGCGAGCGGGGGGACAAGCTGCCGCCCGGGGTTATAAAAAGTATCCGTGTTGAGGTTGCCGAACTAAGGCCGGTTATGGTGGGCGATAAATTGGCTGGTCGTCATGGCAACAAGGGTGTCATCGCTAAAATTTTACCGGAGGAGGAAATGCCCTATTTGCCCGATGGAACGCCGGTGGATGTTATTCTCAATCCTCTTGGCGTTGCTTCCAGGATGAATATTGGGCAGATTCTTGAAACTCATTTAGGATGGGCGGCAAAAATGTTGGGCTATCGGGCTATTTGCCCGTCTTTGGCGGGGCCAAGCGCGGATCGGATTCGGGAAGAACTAAAAGCGGCTGGTCTGCCTCAGGATGGAAAGATTATGCTTTTTGACGGTCAGACTGGCGAGCCCTTTGGCCAGAGGGTAACCGTTGGCTATATTTATGTGATGAAGCTTATTCATTTGGTGGAAGACAAAATTCATATGCGTTCAATCGGTCCCTATTCATTAATCACCCAGCAGCCCTTAGGCGGTAAAGCTCAGTTTGGCGGACAGCGGTTTGGAGAAATGGAAGTTTGGGCTCTTGAGGGATATGGAGCGGCTTATATGCTTCAGGAAATGCTGACAATAAAATCTGATGACGTGGCGGGACGGGCCAACGCGTACGATTCCATTATTCGGGGTCGGAAAATTAAAACCCCCCAAATTCCAGCTTCTTTTGATGTATTGGTTAGCGAGTTGAAAGCACTGGGCTTGGATGTTGATCTAGTGGACGGAAGGCGTAGAGAAGAAGGGGCAGATGATTAA
PROTEIN sequence
Length: 1058
MTKNFSRYQFSSDFPELAEIQLNSYKWFIDQGLRELFDEVSPVRDWSGEELELYFRDYYFEEPKFSEVESRIRGASYEAPLRCLLNLINKKTKQTREQEVYLGDFPLMTDRGTFIINGVERVVVSQLIRSPGIFFTVSYLRGERQFFGAKVIPNRGAWLEFEVDGDGVISVKIDRKRKIAATSLLKAFGMESEEKIKKTFADVDTNKELKFIDVTLSKDQAKNQGEAFIEIYKRLRPGDLAAVDNARQLIEAMFFNFERYDLSKVGRWKLNQRLSINKPTTKENRVFSLDDLVSILKEIIRLSNSSDAHPDDIDHLANRRIRSVGELLQNKLRIGLARTERIIKDRMSILDVETLMPSQLINARPFIASVKEFFTVSQLSQFMDQVNPLAELEHKRRVSAMGPGGLTRERAGFEVRDVHSTYYGRICPIQTPEGPNIGLIGHLACFARLNEYGFIETPYRKIIGGRLSKKIDFLNAFEEQMVNIAHAGVALDKNGNLLESRVEARVKGQPSITKREKIDYIDVSPQQCVSVATALIPFLEHDDANRALMGSNMQRQGVPCIKPQAPLVSTGLEEKAAYDSGHLVISQDDGVIDAVDANNIRVKSARKAKTYPLHTFVRTNQFTCATQRPIVKRGQRVKRGEVLADGMATENGCLALGQNLLCAFLPWRGANFEDAIILSEKLVKEDRFTSIHIEDFICDVRETKLGPEITTPDISNVSEEKLKDLDEEGVVRIGAEVGPNDILVGKISPKGEVDLSAEERLLRAIFGEKARDVKDTSLRLPHGKRGRIVEIHTFSRERGDKLPPGVIKSIRVEVAELRPVMVGDKLAGRHGNKGVIAKILPEEEMPYLPDGTPVDVILNPLGVASRMNIGQILETHLGWAAKMLGYRAICPSLAGPSADRIREELKAAGLPQDGKIMLFDGQTGEPFGQRVTVGYIYVMKLIHLVEDKIHMRSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEGYGAAYMLQEMLTIKSDDVAGRANAYDSIIRGRKIKTPQIPASFDVLVSELKALGLDVDLVDGRRREEGADD*