ggKbase home page

cg2_3.0_scaffold_16005_c_4

Organism: CG2_30_FULL_CP_54_10_curated

near complete RP 42 / 55 BSCG 43 / 51 ASCG 11 / 38 MC: 1
Location: 2191..3843

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=CG_ACD39_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 550.0
  • Bit_score: 1124
  • Evalue 0.0
RNA polymerase, sigma 70 subunit, RpoD subfamily id=44126 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 551.0
  • Bit_score: 537
  • Evalue 1.60e-149
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 271.0
  • Bit_score: 204
  • Evalue 6.90e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_ACD39_01 → ACD39 → Bacteria

Sequences

DNA sequence
Length: 1653
ATGTATTGTTTTGAGAGCTTCCGCTGCGATCGCGAGGACTGCCCGGTTCGCCGCGGAAGAACCCGCCGATGTTGGACCTATTTTGAAGAGCTAGGAATCACCGTAACCACCGAGGAATGTCCGTTCGCGCCCTGCTCTCGATGTCATTACAGGCTGGGGTGGGAGATCGGGCTGATCGGTGACAGCCTGTTTCCAGAGGATCAAAGCACTCCCGCTGACACCCTGACTCCCATTTCCTCGCCACTTGAAAAAGAATCTTCTTCCGCGAGGGTTTTCAACCCGCTCCCCGAGTTTTCCCCCGGACCCGGAATCCCACCGCCTCCCGCCACCCCAATTCCAAAAGCCTCTCCAGAGCCGACATCCCCAGCATCGGCACCGGCACTCCCGTCACCGACACCAGCGCCGGCGACGCCAGCGTTGCCGACACCAGCGCCAGCGACACCAGCGCCTGAGACACCAGCGCCAGCGACCTTTCCAGAGCCCCTGCCCATAACACCACAGCCGGCGCCGACGCCGACGCCGATTATAGGGATTCACGATCTTTCGTTCGATTCCGAAGCGGTTGGCGCAAAGGGGCTTCGATTTTGCTGGGAAGTACTTCCATGCCCCAATCCCAAATGCCCCGTCCGCGAACGTCAGATCATAAGGTGTTTCAAATTTTTCGAACCGAAAGGCGATGCAAAAAAGCTGGAGATCACTCACGGAACGCGGCTTTGTCGGAACTGCCATTACAAACTCGGTTGGGATTTCGGAATCATTCACGAAGGTTTGTTCGTAGATATAACGGAAAAACGAAGGATTCGGAGAAACATTGACGAACGGATCAAACGCCAGGGTATCGTTGAACTCTATCTCAACGAGCTTGCCAAGAAGCCGCTTTCCCGGGAAGAAGAACTCAGCCTGGCGAAGAAAATCGCCGGCGACAAGGATGCAGCAGAGTTGTTTCTGTTGGCGAATCTCAAGCTCGTCGTTCGGATTGCGGGAACATTTTCAAATCGCGGATTGAACATAATGGATCTGATTCAGGAAGGGAACGTTGGCCTCATCAAAGCCATATCGAAATTCGACTGGACTCTCGGATACCGGTTCTCTACGTACGCAGCCTATTGGGTAAAAAATTACATGCAGATGGCGATCAGCGATCAGGTTCGCACGATAAGAGTTCCCCACCATTTATTGGCTGTCGCACACAAGATCAGGCGAGCGATTAACGACCTGCAAGCCCAGTATTTTCGGGCGCCCACACTAAAAGAGCTGTCGGCTATCCTAATGCTCGAAGAGGAAAAAATCCTTGACGTCCTTCGCCTGACCGAAACACCAATTTCAATTGAAGCGAAACAAAACAACGAAGACGACGAAGATGCGTCTCCGGAATACTTCCTTACGGACAATACAAGCTTGTCCCCTGAAGAAAAAGCCCTGGAAAATGCGAAATCAGAGGCCTGTCAAAAAGCCCTGGCCATGCTTCCGGACCGCCTTCGGGAAGTCGCCGAATCTTATTACGGCTTCCGCGACGAGCAGTTGAGCTTAGCCGAGATCGGGCGGCGGATGGGCATCAGCCGGGAAAGAGCTCGACAGCTTCTGGTTCAGGCTCTTGAAGAATTGAGGCATCACGAGTTCGTGGCGAACATGAAGGATTTTTTAACACCGTAG
PROTEIN sequence
Length: 551
MYCFESFRCDREDCPVRRGRTRRCWTYFEELGITVTTEECPFAPCSRCHYRLGWEIGLIGDSLFPEDQSTPADTLTPISSPLEKESSSARVFNPLPEFSPGPGIPPPPATPIPKASPEPTSPASAPALPSPTPAPATPALPTPAPATPAPETPAPATFPEPLPITPQPAPTPTPIIGIHDLSFDSEAVGAKGLRFCWEVLPCPNPKCPVRERQIIRCFKFFEPKGDAKKLEITHGTRLCRNCHYKLGWDFGIIHEGLFVDITEKRRIRRNIDERIKRQGIVELYLNELAKKPLSREEELSLAKKIAGDKDAAELFLLANLKLVVRIAGTFSNRGLNIMDLIQEGNVGLIKAISKFDWTLGYRFSTYAAYWVKNYMQMAISDQVRTIRVPHHLLAVAHKIRRAINDLQAQYFRAPTLKELSAILMLEEEKILDVLRLTETPISIEAKQNNEDDEDASPEYFLTDNTSLSPEEKALENAKSEACQKALAMLPDRLREVAESYYGFRDEQLSLAEIGRRMGISRERARQLLVQALEELRHHEFVANMKDFLTP*