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cg2_3.0_scaffold_3620_c_1

Organism: Deltaproteobacteria bacterium CG2_30_43_15

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 3..248

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=CG_Desulfob_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 159
  • Evalue 2.40e-36
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 82.0
  • Bit_score: 112
  • Evalue 2.50e-22
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 82.0
  • Bit_score: 112
  • Evalue 6.90e-23

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Taxonomy

CG_Desulfob_01 → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ACCTCATCTTTAGATAGTGAGTCTGAAATTGAGGTACAAAATGCCCTGGAAAACCTTATGAAGAATAGAACTACTTTCATCATTGCCCACCGGCTTTCTACTATTAGAAATGCTAACAGGATAATAGTTATCGTTGGGGGGGATGTTGTTGAAGAAGGAGTACATGAAGAACTTCTCAAGAGGAACGGAGAGTATACAAAACTCTACGAATTACAGTTTAGAGAGAATGGAGAGGTTGTTAAATAG
PROTEIN sequence
Length: 82
TSSLDSESEIEVQNALENLMKNRTTFIIAHRLSTIRNANRIIVIVGGDVVEEGVHEELLKRNGEYTKLYELQFRENGEVVK*