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cg2_3.0_scaffold_10312_c_5

Organism: Syntrophaceae bacterium CG2_30_49_12

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 ASCG 13 / 38
Location: comp(3207..4973)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVE8_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 588.0
  • Bit_score: 775
  • Evalue 2.80e-221
  • rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=CG_Delta_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 588.0
  • Bit_score: 1132
  • Evalue 0.0
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 588.0
  • Bit_score: 775
  • Evalue 8.00e-222

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Taxonomy

CG_Delta_05 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
ATGGGGAAAAAAATAGGGCACGAAGAATTTAAAAAATTAATCTCCCTGGGTGAGGAAAAGGGATTTCTAACCTATGATGATGTCAATGATTTACTGCCATCCGATGTTTCTTCTAACCAGATCGATGACATTATCATGCTCTTCGGTGAGAAAAACATTGACATTATAGATACGGAGAAGGGTGAAAAACTCGTCGTAAAAAAAGCAACGGAGGAAGAAGAGGCAGAAATTCACGAAACCAAGGAGGCAGGCGCCTATGATCTTATGTCCACCATTATTAAAATGGGGGACCCGGTAAAGATGTACCTTCATGAAATGGGGCTTGTGTCTCTGCTCTCCCGGGAGGAGGAGGTCAAAATTGCGAAAAAGATCGAAGAGGGGGCCAGGAAGGTTGTGGCCGCTGTCTTCAGTACGGCGATTTCCGTCAAGAATGTAGTGGATACCGGTGCGAAATTGAAGAGTGGGGAACTTCGCATAAAGAATGTCGTGGATAATCTTGAAGATGAGGATGGTTTTGTAGAAGAAGATGCACATAAAGAGAGGGTCTTAAAGCTCATTGATAAAATAACGGCCCTGGACAACAAAAATACCATTCTTAAGCGTAAGTTAAAAGTAAAAGGCGCCGGAAAGATTCATGAGAAACAGAGAAACGCCATTAAATTAGAACTGGAGAAGAACAGAAAGGCCATCGTACATCTGTGTAGGAAAGTAAGGTTCAGTAAAAGACAGATAGAAAGAATGGTTTTAAGACTCAAGAATTATGTAATTGATATAGAGAAGGCAGAAAATGACATTCACTCTTGCAAAGAGGAAACAGGTATGCCCCTTACCCAGATGGAAAATTTCTGGGTTCGTATGAAAACCTCGCCGGAGGAAGAGCAACGGGTGGCCAGACAGACCGGAATCGCCATTGACAGGTTAAAGGAATATGAGACCATAGTCAGGGAAGCTAAGAGAAAGATTAAAAAGATTGTGGAGGAAACAGAACTTTCTGTTACTTTTCTGAAGCAAGTAGTTATCTCTATAGAAAAAGGGGAGAAGGAAGCGGAGGCGGAAAAAAGGAAGCTGGCGGAAGCAAACCTTCGTTTGGTTGTCAGTATTGCAAAAAAATATACCAATAGAGGATTGCAGTTTCTGGATCTGATTCAGGAAGGAAATATCGGGCTGATGAAGGCTGTTGATAAATTCGAATATCAGCGGGGATACAAATTTTCCACTTATGCCACCTGGTGGATCAGGCAGGCGATCACACGAGCCATAGCCGATCAGGCAAGAACGATAAGAATTCCCGTACATATGATCGAGACGATTAACAAGCTGATCAGAACTTCCCGCTATCTGGTTCAGGAATTGGGGAGAGAACCTACTCCTGAGGAAATTGCCAACAAAATGGAGTATCCTCTGGAGAAGGTCAGAAAAGTCTTGAAGATTGCCAAGGAACCTATATCTCTGGAAACACCCATCGGCGAAGAGGAAGACAGTCATCTTGGTGATTTCATAGAGGACAAGAGGATTATGTCTCCTTCAGACGTAACGATAAGAATGGACCTTGTTGAACAGACAAGAAAAATACTAACCACCCTGACACCAAGGGAGGAAAAGGTGCTAAGAATGCGTTTTGGTATCAGTGAGCGGCTCGATCTTCCTTCCGAGAAAATAGTAGCTTTATCAGACACCAGGGAACGGATAAGGCAGCTCGATGCTAATATCTTGGGAAAGGAGGAAAGAATTAGGAATCACTCCCGGAGAAGGATATCGAAACCCTAG
PROTEIN sequence
Length: 589
MGKKIGHEEFKKLISLGEEKGFLTYDDVNDLLPSDVSSNQIDDIIMLFGEKNIDIIDTEKGEKLVVKKATEEEEAEIHETKEAGAYDLMSTIIKMGDPVKMYLHEMGLVSLLSREEEVKIAKKIEEGARKVVAAVFSTAISVKNVVDTGAKLKSGELRIKNVVDNLEDEDGFVEEDAHKERVLKLIDKITALDNKNTILKRKLKVKGAGKIHEKQRNAIKLELEKNRKAIVHLCRKVRFSKRQIERMVLRLKNYVIDIEKAENDIHSCKEETGMPLTQMENFWVRMKTSPEEEQRVARQTGIAIDRLKEYETIVREAKRKIKKIVEETELSVTFLKQVVISIEKGEKEAEAEKRKLAEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGREPTPEEIANKMEYPLEKVRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKRIMSPSDVTIRMDLVEQTRKILTTLTPREEKVLRMRFGISERLDLPSEKIVALSDTRERIRQLDANILGKEERIRNHSRRRISKP*